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Taxonomy browser (Staphylococcus epidermidis)

Staphylococcus epidermidis

Taxonomy ID: 1282 (for references in articles please use NCBI:txid1282)
current name
Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980) (Winslow and Winslow 1908) Evans 1916
type strain of Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980): ATCC:14990, CCM:2124, CCUG:18000 A, CCUG:39508, CIP:81.55, DSM:20044, JCM:2414, BCCM/LMG:10474, NBRC:100911, NCAIM B.01066, NCTC:11047
basionym:
"Albococcus epidermidis" Winslow and Winslow 1908, effective name 1)
homotypic synonym:
"Micrococcus epidermidis" (Winslow and Winslow 1908) Hucker 1924, effective name 2)
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Staphylococcus epidermidis albus" Welch 1891, effective name 3)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 431,138 408,489 315
Protein 1,638,991 1,414,433 -
Structure 111 35 -
Genome 1 1 -
Popset 470 470 -
Conserved Domains 2 1 -
GEO Datasets 396 329 -
PubMed Central 25,005 25,005 -
Gene 8,293 2,945 -
SRA Experiments 7,709 7,501 -
GEO Profiles 46,030 23,015 -
Protein Clusters 3,056 3,056 -
Identical Protein Groups 382,462 372,326 -
BioProject 560 443 -
BioSample 10,451 10,260 18
Assembly 4,903 4,765 -
PubChem BioAssay 2,593 2,588 -
Taxonomy 112 1 -

Notes:

Comments and References:

image:Staphylococcus epidermidis
Cole K et al. (2019), other link:https://mra.asm.org/content/8/17/e00062-19
Cole, K., Foster, D., Russell, J.E., Golubchik, T., Llewelyn, M., Wilson, D.J., Crook, D., and Paul, J., Modernising Medical Microbiology Consortium. "Draft genome sequences of 64 type strains of 50 species and 25 subspecies of the genus Staphylococcus Rosenbach 1884." Microbiol. Resour. Announc. (2019) 8:e00062-19.
Schleifer KH & Kloos WE (1975), doi:10.1099/00207713-25-1-50
Schleifer, K.H., and Kloos, W.E. "Isolation and characterization of staphylococci from human skin. I. Amended descriptions of Staphylococcus epidermidis and Staphylococcus saprophyticus,and descriptions of three new species: Staphylococcus cohnii, Staphylococcus haem, and Staphylococcus xylosus." Int. J. Syst. Bacteriol. (1975) 25:50-61. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Wieser M & Busse HJ (2000)
Wieser, M., and Busse, H.J. "Rapid identification of Staphylococcus epidermidis." Int. J. Syst. Evol. Microbiol. (2000) 50:1087-1093.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Staphylococcus epidermidis meta-databases BacDive
16 records from this provider organism-specific BioCyc
Staphylococcus epidermidis (Winslow and Winslow 1908) Evans 1916 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
31 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Staphylococcus epidermidis culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
83 records from this provider organism-specific Integrated Microbial Genomes
Staphylococcus epidermidis taxonomy/phylogenetic Integrated Taxonomic Information System
Staphylococcus epidermidis taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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