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Taxonomy browser (Streptococcus pneumoniae)

Streptococcus pneumoniae

Taxonomy ID: 1313 (for references in articles please use NCBI:txid1313)
current name
Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980) (Klein 1884) Chester 1901
type strain of Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980): ATCC:33400, CCUG:28588, CIP:102911, DSM:20566, BCCM/LMG:14545, NBRC:102642, NCTC:7465
basionym:
"Micrococcus pneumoniae" Klein 1884, effective name 1)
homotypic synonym:
"Diplococcus pneumoniae" (Klein 1884) Weichselbaum 1886, effective name 2)
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( abbreviated )
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 2,212,432 2,186,944 567
Protein 46,503,618 45,892,248 -
Structure 793 298 -
Genome 1 1 -
Popset 272 272 -
Conserved Domains 5 5 -
GEO Datasets 2,279 1,587 -
PubMed Central 50,240 50,240 -
Gene 65,064 8,533 -
SRA Experiments 122,598 118,039 -
Protein Clusters 3,634 3,634 -
Identical Protein Groups 1,832,712 1,803,189 -
BioProject 1,051 579 -
BioSample 134,878 130,078 5
Assembly 47,137 46,670 -
Genetic Testing Registry 1 1 -
PubChem BioAssay 4,331 4,191 -
Taxonomy 340 1 -

Notes:

Comments and References:

image:Streptococcus pneumoniae
Chester FD (1901)
Chester, F.D. A manual of determinative bacteriology. The Macmillan Co., New York, (1901) pp. 1-401. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Streptococcus pneumoniae meta-databases BacDive
55 records from this provider organism-specific BioCyc
Streptococcus pneumoniae (Klein 1884) Chester 1901 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
23 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Streptococcus pneumoniae culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
925 records from this provider organism-specific Integrated Microbial Genomes
Streptococcus pneumoniae taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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