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Taxonomy browser (Clostridium perfringens)

Clostridium perfringens

Taxonomy ID: 1502 (for references in articles please use NCBI:txid1502)
current name
Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980) in [Skerman VBD et al. (1980), Hauduroy P et al. (1937)]
homotypic synonym:
"Bacillus perfringens" Veillon and Zuber 1898, effective name 1) in [Veillon A & Zuber A (1898)]
type strain of "Bacillus perfringens": ATCC:13124, BCRC:10913, CCUG:1795, CIP:103409, DSM:756, JCM:1290, BCCM/LMG:11264, NCAIM B.01417, NCCB:89165, NCIMB:6125, NCTC:8237, ATCC:19408
includes:
Clostridium sp. NCIM 2677
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Bacterium welchii" Migula 1900, effective name 1)
heterotypic synonym
"Clostridium plagarum" (Prévot 1938) Smith and Hobbs 1974, effective name 1) in [Smith LDS & Hobbs G (1974)]
reference strain of "Clostridium plagarum": ATCC:25768, NCIMB:10620, DSM:2943
Lineage( abbreviated )
Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 95,472 90,697 49
Protein 811,505 742,850 -
Structure 251 158 -
Genome 1 1 -
Popset 163 161 -
GEO Datasets 338 291 -
PubMed Central 13,932 13,932 -
Gene 15,559 3,787 -
SRA Experiments 1,768 1,275 -
Protein Clusters 3,604 3,604 -
Identical Protein Groups 535,820 533,953 -
BioProject 250 218 -
BioSample 3,158 2,678 8
Assembly 1,841 1,813 2
PubChem BioAssay 277 266 -
Taxonomy 22 1 -

Notes:

Comments and References:

Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Hauduroy P et al. (1937)
Hauduroy, P., Ehringer, G., Urbain, A., Guillot, G., and Magrou, J.: Dictionaire des bactéries pathogènes. Masson et Cie, Paris (1937). [No PubMed record available.]
Veillon A & Zuber A (1898)
Veillon, A., and Zuber, A. "Recherches sur quelques microbes strictement anaérobies et leur rôle en pathologie." Archives de Medecine Experimentale et d'Anatomie Pathologique (1898) 10:517-545. [No PubMed record available.]
Smith LDS & Hobbs G (1974)
Smith, L.D.S., and Hobbs, G. "Genus III Clostridium Prazmowski 1880, 23." In: Buchanan and Gibbons (eds.), Bergeys's Manual of Determinative Bacteriology, 8th Edition. The Williams and Wilkins Co., Baltimore, pp. 551-572. 1974.
image:Clostridium perfringens
Canard B et al. (1992)
Canard, B., Garnier, T., Lafay, B., Christen, R., Cole, S.T. "Phylogenetic analysis of the pathogenic anaerobe Clostridium perfringens using the 16S rRNA nucleotide sequence." Int. J. Syst. Bacteriol. (1992) 42(2):312-314.
Migula W (1900)
Migula, W. System der Bakterien, Vol. 2. (1900) Gustav Fischer, Jena. [No PubMed record available.]
Nakamura S et al. (1976)
Nakamura, S., Sakurai, M., Nishida, S., Tatsuki, T., Yanagase, Y., Higashi, Y., and Amano, T. "Lecithinase-negative variants of Clostridium perfringens: the identity of C. plagarum with C. perfringens." Can. J. Microbiol. (1976) 22:1497-1501.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clostridium perfringens meta-databases BacDive
2 records from this provider organism-specific BioCyc
Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
11 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Clostridium perfringens culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
50 records from this provider organism-specific Integrated Microbial Genomes
Clostridium perfringens (Veillon and Zuber, 1898) Hauduroy et al., 1937 taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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