Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Caedimonas varicaedens)

Caedimonas varicaedens

Taxonomy ID: 1629334 (for references in articles please use NCBI:txid1629334)
current name
"Caedimonas varicaedens" (Quackenbush 1982) Schrallhammer et al. 2018, effective name 1)
type strain of "Caedimonas varicaedens": personal::7, ATCC:30637
homotypic synonym:
Caedibacter varicaedens Quackenbush 1982
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Caedibacter caryophilus corrig. Schmidt et al. 1987
type strain of Caedibacter caryophilus: ATCC:50168, personal::221
heterotypic synonym
Caedibacter caryophila
heterotypic synonym
"Caedibacter macronucleorum" Fokin and Gortz 1993, effective name 2)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Holosporales; Caedimonadaceae; Caedimonas
   Entrez records   
Database name Direct links
Nucleotide 177
Protein 1,728
Genome 1
Popset 1
PubMed Central 50
Identical Protein Groups 1,665
BioProject 1
BioSample 1
Assembly 1
Taxonomy 1

Notes:

Comments and References:

Euzeby JP (1997b) (reference relating to orthographic change)
Euzeby, J.P. "Revised nomenclature of specific or subspecific epithets that do not agree in gender with generic names that end in -bacter." Int. J. Syst. Bacteriol. (1997) 47:585. [No PubMed record available.]
Fokin S & Gortz HD (1993)
Fokin, S., and Gortz, H.-D. "Caedibacter macronucleorum sp. nov., a bacterium inhabiting the macronucleus of Paramecium duboscqui." Arch. Protistenkunde (1993) 143:319-324. [No PubMed record available.]
Quackenbush RL (1978)
Quackenbush, R.L. "Genetic relationships among bacterial endosymbionts of Paramecium aurelia. Deoxyribonucleotide sequence relationships among members of Caedibacter." J. Gen. Microbiol. (1978) 108:181-187. [No PubMed record available.]
Schmidt HJ et al. (1987)
Schmidt, H.J., Gortz, H.D., and Quackenbush, R.L. "Caedibacter caryophila sp. nov., a killer symbiont inhabiting the macronucleus of Paramecium caudatum." Int. J. Syst. Bacteriol. (1987) 37:459-462. [No PubMed record available.]
Schmidt HJ et al. (1988)
Schmidt, H.J., Gortz, H.D., Pond, F.R., and Quackenbush, R.L. "Characterization of Caedibacter endonucleobionts from the macronucleus of Paramecium caudatum and the identification of a mutant with blocked R-body synthesis." Exp. Cell Res. (1988) 174:49-57.
Schrallhammer M et al. (2018)
Schrallhammer, M., Castelli, M., and Petroni, G. "Phylogenetic relationships among endosymbiotic R-body producer: Bacteria providing their host the killer trait." Syst. Appl. Microbiol. (2018) 41:213-220.
Springer N et al. (1993)
Springer, N., Ludwig, W., Amann, R., Schmidt, H.J., Gortz, H.D., and Schleifer, K.H. "Occurrence of fragmented 16S rRNA in an obligate bacterial endosymbiont of Paramecium caudatum." Proc. Natl. Acad. Sci. USA. (1993) 90:9892-9895.
Suzuki H et al. (2015)
Suzuki, H., Dapper, A.L., Jackson, C.E., Lee, H., Pejaver, V., Doak, T.G., Lynch, M., and Preer, J.R. Jr. "Draft genome sequence of Caedibacter varicaedens, a kappa killer endosymbiont bacterium of the ciliate Paramecium biaurelia." Genome Announc. (2015) 3:e01310-15.
VALIDATION LIST No. 8 (1982) (Caedibacter varicaedens)
VALIDATION LIST No. 8. Int. J. Syst. Bacteriol. (1982) 32:266-268.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: Go0144534 organism-specific Genomes On Line Database
2740892217: Caedimonas varicaedens organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers



Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]