Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Vibrio chagasii)

Vibrio chagasii

Taxonomy ID: 170679 (for references in articles please use NCBI:txid170679)
current name
Vibrio chagasii Thompson et al. 2003
type strain of Vibrio chagasii: personal::R-3712, CAIM:431, BCCM/LMG:21353, CCUG:48643, DSM:17138
includes:
Vibrio sp. LMG 13219
Vibrio sp. R-3712
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
   Entrez records   
Database name Direct links Links from type
Nucleotide 8,416 712
Protein 719,061 -
Genome 1 -
Popset 56 -
PubMed Central 26 -
Gene 10,054 -
SRA Experiments 2 -
Identical Protein Groups 89,351 -
BioProject 11 -
BioSample 153 4
Assembly 150 -
Taxonomy 1 -

Comments and References:

Thompson FL et al. (2003c)
Thompson, F.L., Thompson, C.C., Li, Y., Gomez-Gil, B., Vandenberghe, J., Hoste, B. and Swings J. "Vibrio kanaloae sp. nov., Vibrio pomeroyi sp. nov. and Vibrio chagasii sp. nov., from sea water and marine mammals." Int. J. Syst. Evol. Microbiol. (2003) 53:753-759. Published online 4 October 2002: DOI 10.1099/ijs.0.02490-0

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Vibrio chagasii meta-databases BacDive
4 records from this provider organism-specific BioCyc
Vibrio chagasii Thompson et al. 2003 taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Vibrio chagasii culture/stock collections Global Catalogue of Microorganisms
4 records from this provider organism-specific Integrated Microbial Genomes
Vibrio chagasii taxonomy/phylogenetic Lifemap
Vibrio chagasii Thompson, Thompson, Li, Gomez-Gil, Vandenberghe, Hoste & Swings, 2003 taxonomy/phylogenetic Ocean Biogeographic Information System
Vibrio chagasii Thompson, Thompson, Li, Gomez-Gil, Vandenberghe, Hoste & Swings, 2003 taxonomy/phylogenetic World Register of Marine Species
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
00-90-10 [1 103] 1DA1 [1 1 1] 21N-12 [4 4 7] 27_O_13 [1 58 5149]
28_FP_16 [1 53 5206] 28_O_22 [1 39 5056] 29_O_37 [1 111 5805] 29_O_39 [1 40 5042]
3-7 [1] 30_O_60 [1 41 4931] 31_O_71 [1 37 5130] 31_O_73 [1 66 5117]
32_O_87 [1 60 5017] 32_P_90 [1 38 4933] 34_O_109 [1 63 5088] 34_P_112 [1 67 5303]
34_P_114 [1 36 4930] 34_P_115 [1 50 5123] 34_P_116 [1 41 4927] 34_P_117 [1 62 4814]
34_P_120 [1 53 5155] 34_P_121 [1 43 5038] 34_P_126 [1 52 5208] 34_P_129 [1 58 5042]
34_P_131 [1 37 4898] 35_O_135 [1 52 4940] 35_O_137 [1 39 4985] 35_O_141 [1 67 5097]
35_O_142 [1 46 5100] 35_O_143 [1 64 5111] 35_P_150 [1 49 5181] 36_O_157 [1 47 5117]
36_O_163 [1 38 5021] 36_P_161 [1 40 5055] 36_P_164 [1 55 5065] 36_P_166 [1 62 5189]
36_P_168 [1 41 5064] 37_O_173 [1 40 5039] 37_O_177 [1 58 5131] 37_P_191 [1 53 5267]
37_P_192 [1 49 4970] 37_P_193 [1 84 5259] 37_P_194 [1 37 4857] 37_P_199 [1 41 4901]
37_P_200 [1 32 4901] 37_P_202 [1 56 4992] 37_P_203 [1 47 5073] 38_O_206 [1 51 5065]
38_O_209 [1 54 5219] 38_O_210 [1 43 5082] 38_P_215 [1 56 5174] 38_P_217 [1 39 4988]
39_O_220 [1 51 5210] 39_O_224 [1 50 5190] 39_P_226 [1 54 5133] 39_P_230 [1 42 4865]
40_O_231 [1 49 4845] 40_O_235 [1 44 5064] 40_O_236 [1 59 4817] 40_O_237 [1 57 4879]
40_P_238 [1 47 5120] 40_P_240 [1 36 5057] 40_P_242 [1 48 5003] 41_O_245 [1 64 5073]
41_O_246 [1 47 5035] 41_O_247 [1 44 5189] 41_O_249 [1 44 5107] 42_O_253 [1 46 5136]
42_P_256 [1 45 5107] 43_O_270 [1 36 5080] 43_P_272 [1 48 5102] 43_P_273 [1 70 5303]
43_P_274 [1 35 4896] 43_P_275 [1 58 5079] 43_P_277 [1 42 5191] 43_P_282 [1 42 4962]
43_P_284 [1 57 5031] 44_O_286 [1 57 5331] 47_P_369 [1 30 4926] 48_O_428 [1 56 5160]
48_O_429 [1 45 4970] 48_P_434 [1 51 5192] 48_P_435 [1 32 4912] 48_P_437 [1 53 4944]
48_P_439 [1 58 4824] 48_P_442 [1 53 5064] 49_P_379 [1 61 5098] 49_P_380 [1 57 5193]
49_P_381 [1 38 4892] 49_P_382 [1 38 5026] 50_O_384 [1 32 4929] 50_O_387 [1 33 4920]
50_O_393 [1 43 5060] 50_O_396 [1 63 5110] 50_O_402 [1 28 4943] 50_O_404 [1 32 4916]
50_O_405 [1 29 4922] 50_O_407 [1 51 5150] 50_O_409 [1 28 4940] 50_O_413 [1 30 4930]
50_P_415 [1 42 4976] 50_P_416 [1 48 5102] 50_P_417 [1 56 5203] 50_P_420 [1 42 5226]
50_P_424 [1 39 5150] 51_O_444 [1 43 5947] 51_O_448 [1 33 4917] 52_P_453 [1 60 5130]
52_P_454 [1 58 5058] 52_P_455 [1 59 5049] 52_P_456 [1 43 5159] 52_P_461 [1 41 5063]
53_O_462 [1 61 4817] 53_O_463 [1 68 5348] 53_O_464 [1 53 4962] 53_O_466 [1 51 6357]
53_O_468 [1 36 4894] 53_O_469 [1 39 4848] 53_O_473 [1 64 5140] 53_O_474 [1 46 5896]
53_O_480 [1 67 5037] 53_P_481 [1 61 5026] 54_O_482 [1 36 5030] 54_O_485 [1 52 4869]
54_P_486 [1 71 4937] 54_P_489 [1 55 5011] 54_P_495 [1 67 4946] 54_P_496 [1 67 4950]
54_P_499 [1 46 4994] 54_P_500 [1 60 4830] 54_P_501 [1 49 4998] 55_O_506 [1 43 4865]
55_O_507 [1 34 4905] 55_O_508 [1 52 4964] 55_P_509 [1 53 4872] 56_P_515 [1 67 5348]
56_P_521 [1 45 5067] 57_P_511 [1 45 5040] 57_P_526 [1 46 4857] 57_P_527 [1 52 4933]
58295 [1 1] 58310 [1 1] 720C_25 [1] 720C_26 [1]
720C_29 [1] 720C_41 [1] 720C_42 [1] 720C_46 [1]
A-363 [1 1 1] A-393 [1 1 1] A483 [1 1 1] A488 [1 1 1]
A522 [1 1 1] A532 [1 1 1] A545 [1 1 1] A557 [1 1 1]
A576 [1 1 1] A590 [1 1 1] AP619 [1 1] AbG-1906 [1]
AbG-1907 [1] B03 [1 1] B15-5 [1] B16-6 [1]
B17-2 [1] B6-3 [1] BBCC2353 [1 1] BBCC583 [1 1]
BBCC586 [1 1] BBCC640 [1 1] Bon143 [1] CAIM 1233 [1 1 1]
CAIM 186 [1 1] CAIM 431 [1 2] CAIM 836 [1 1] CAIM 848 [1 1]
CAIM 885 [1 1] CCCM21_190 [1] CCUG 48643 [1 390 4723] CECT 8435 [6 5]
CECT 8436 [5 4] CEMTC_9789 [1] CSMCRI-23 [1 1] Cr2 [1]
D7 [1] DG-3 [1] DS1901-S911 [1] DS1904-Y1145 [1]
DSM 17138 [2 1] DUG27 [1] ECSMB14107 [1 1 2] ECSMB14115 [1]
EXT6 [1] F272 [1] G3C_10m_M_06 [1 1] G5C_0m_M_10 [1 1]
G5C_24m_15 [1 1] G5C_7m_PrM_03 [1 1] G7C_48m_09 [1 1] G7C_48m_13 [1 1]
G9C_35m_09 [1 1] G9C_38m_M_08 [1 1] G9C_66m_13 [1 1] GCZ10 [1 1]
GTC 2776 [1 1] Gal_3 [1] Gal_43 [1 1] H029 [1 1]
H055 [1 1] H072 [1 1] H5 [1] HCG-13005 [2 1]
HCG-14004 [2 1] HCG-14005 [2 1] HCG-14033 [2 1] HFJ110 [1]
HFJ112 [1] HFJ113 [1] HFJ133 [1] HFJ136 [1]
HFJ143 [1] HFJ147 [1] HFJ28 [1] HFJ66 [1]
HFJ77 [1] HNS039 [1 1] HSJ-02 [1] HSJ-03 [1]
IMP-BG-B034 [4 3] IMP-BG-B036 [4 3] KEF_47 [1 1] KEF_51 [1 1]
KOTS3C_M_26m_01 [1 1] KOTS3C_M_47m_04 [1 1] Kef_57 [1 1] LC2-408 [1 1 32 4378]
LMG 13219 [7 3 6] LMG 13220 [1] LMG 13237 [6 3 5] LMG 21353 [1 2 306 10 10]
LMG 21353T [1 1] LMG 21354 [1] LMG21353 [3 3 3] M03 [2 1 2]
M05 [1 1] M14-00480 [1 97] M14-00606 [1 35] M14-00606b [1 49]
M14-00614 [1 46] M1C_M_0m_03 [1 1] M2_25m_PrM_08 [1 1] M4C_M_3m_09 [1 1]
M8C_M_27m_08 [1 1] M8C_M_50m_09 [1 1] MCCC1A09875 [1 1] Mj162 [1 1]
Mj247 [1 1] Mj252 [1 1] Mj258 [1 1] Mu-115 [1]
Mu115 [1 1 176] NIOSSD026480 [1 1] NIOSSD026495 [1 1] P67-CTD01-30-2-1 [1]
PA10 [1 1 1] PEL47A [1 1 1] R-115 [3 2] R-26 [3 2]
R-3712 [153 89351 8416 56 2] R-47 [3 2] R-48 [3 2] R-49 [3 2]
R-52 [3 2] R-6 [3 2] R-670 [3 2] R-683 [3 2]
RUSHAN5 [1] RUSHAN6 [1] RUSHAN7 [1] S10 [2 1 2]
S14A1 [1 1] S15B12 [1 1] S16D4 [1 1] S23A11 [1 1]
S23B2 [1 1] S23C11 [1 1] S23D9 [1 1] S23H10 [1 1]
S23H9 [1 1] S844 [1] SB-52 [4 4 7] SW199 [1 1]
UDC304 [1 1] UDC365 [1 1] UST000620-026 [2 1] UST000621-026 [2 1]
VIB100 [1 1 1] VIB116 [1 1 1] VIB33 [1 1 1] VPAP36 [1 1 1]
VPAP40 [1 1] VPMP43 [1 1] VSG530 [1 1] W1 34E10 [1 1]
W10_1620/8 [1 1 1] W11A10 [1 1] W11A12 [1 1] W11B2 [1 1]
W14B9 [1 1] W14E3 [1 1] W14F2 [1 1] W14H8 [1 1]
W16A2 [1 1] W16B10 [1 1] W16B11 [1 1] W16B9 [1 1]
W16C11 [1 1] W16C12 [1 1] W16C4 [1 1] W16C9 [1 1]
W21C9 [1 1] W21E10 [1 1] W21G12 [1 1] W21H12 [1 1]
W23G10 [1 1] W23G7 [1 1] W26G10 [1 1] W26H10 [1 1]
W26H7 [1 1] W26H8 [1 1] WC_19 [3 3 3] WENDENG12 [1]
WENDENG13 [1] WENDENG15 [1] WENDENG16 [1] WENDENG20 [1]
WENDENG28 [1] WENDENG4 [1] WHD11 [1 1] WHD3 [1 1]
WMB26 [1 1] WaY-2101 [1] algae_30 [1] type strain: LMG 21353 [5 5]
isolate
11OM26 [6 5] 11OM30 [6 5] 11OM4 [6 5] 7OM17 [6 5]
7OM20 [6 5] 7OM29 [6 5] 7OM34 [6 5] 8OM2 [6 5]
8OM22 [6 5] 8OM3 [6 5] 8OM30 [6 5] 96-91 [5 4]
AP13 [1] AP6 [1] Ca5 [4 3] Ca8 [4 3]
Vibrio chagasii 18LP [100] XOM11 [6 5] XOM13 [6 5] XOM14 [6 5]
XOM15 [6 5] XOM4 [6 5]
nat-host
Argopecten purpuratus [2] Crassostrea gigas [4]
culture-collection
CCUG:48643 [1 390 4723] DSM:17138 [2 1] LMG:21353 [1 285]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]