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Taxonomy browser (Mycobacterium marinum)

Mycobacterium marinum

Taxonomy ID: 1781 (for references in articles please use NCBI:txid1781)
current name
Mycobacterium marinum Aronson 1926 (Approved Lists 1980) 1) in [Skerman VBD et al. (1980), Aronson JD (1926)]
type strain of Mycobacterium marinum: ATCC:927, CCUG:20998, CCUG:27843, CIP:104528, DSM:44344, JCM:12275, JCM:17638, NCTC:2275, NCIMB:1297, NCIMB:1303
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Mycobacterium platypoecilus" Baker and Hagan 1942, effective name 2)
heterotypic synonym
"Mycobacterium balnei" Linell and Norden 1952, effective name 3)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium ulcerans group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 33,174 32,344 812
Protein 314,468 292,154 -
Structure 71 10 -
Genome 1 1 -
Popset 37 37 -
GEO Datasets 243 206 -
PubMed Central 2,946 2,946 -
Gene 16,914 5,410 -
SRA Experiments 500 467 -
Protein Clusters 3,848 3,848 -
Identical Protein Groups 84,900 81,090 -
BioProject 62 49 -
BioSample 542 503 8
Assembly 62 56 -
PubChem BioAssay 82 82 -
Taxonomy 7 1 -


Comments and References:

Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Aronson JD (1926)
Aronson, J.D. "Spontaneous tuberculosis in salt water fish." J. Infect. Dis. (1926) 39(4):315-320.
image:Mycobacterium marinum
Chemial K et al. (2002)
Chemlal, K., Huys, G., Laval, F., Vincent, V., Savage, C., Gutierrez, C., Laneelle, M.A., Swings, J., Meyers, W.M., Daffe, M., and Portaels, F. "Characterization of an unusual mycobacterium: a possible missing link between Mycobacterium marinum and Mycobacterium ulcerans." J. Clin. Microbiol. (2002) 40:2370-2380.
Pidot SJ et al. (2010), other link:
Pidot, S.J., Asiedu, K., Kàˆser, M., Fyfe, J.A., and Stinear, T.P. "Mycobacterium ulcerans and other mycolactone-producing mycobacteria should be considered a single species." PLoS Negl. Trop. Dis. (2010) 4(7):e663.
Savijoki K et al. (2024), doi:10.1128/mra.01016-23
Savijoki, K., Deptula, P., Roberts, R.J., Milka, H., Yli-Kauhaluoma, J., Varmanen, P., and Parikka, M. "Revised whole genome and DNA methylome of Mycobacterium marinum type strain ATCC 927(T)." Microbiol. Resour. Announc. (2024) 13(4):e01016-23.
Yoshida M et al. (2018b)
Yoshida, M., Fukano, H., Miyamoto, Y., Shibayama, K., Suzuki, M., and Hoshino, Y. "Complete genome sequence of Mycobacterium marinum ATCC 927T, obtained using Nanopore and Illumina sequencing technologies." Genome Announc. (2018) 6:e00397-18.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium marinum meta-databases BacDive
2 records from this provider organism-specific BioCyc
Mycobacterium marinum Aronson 1926 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0106285 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Mycobacterium marinum culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
18 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium marinum Aronson, 1926 taxonomy/phylogenetic Integrated Taxonomic Information System
Mycobacterium marinum taxonomy/phylogenetic Lifemap
Mycobacterium marinum Aronson taxonomy/phylogenetic Ocean Biogeographic Information System
Mycobacterium marinum Aronson taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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