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Taxonomy browser (Escherichia coli 042)

Escherichia coli 042

Taxonomy ID: 216592 (for references in articles please use NCBI:txid216592)
current name
Escherichia coli 042
Escherichia coli str. 042
NCBI BLAST name: enterobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Host: bacteria|vertebrates
Other names:
heterotypic synonym
EAEC 042
heterotypic synonym
enteroaggregative Escherichia coli strain 042
Escherichia coli strain 042
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli O44:H18
   Entrez records   
Database name Direct links
Nucleotide 36
Protein 10,699
Structure 15
Genome 1
Popset 13
GEO Datasets 17
PubMed Central 185
Gene 5,046
SRA Experiments 29
Identical Protein Groups 11,501
BioProject 10
BioSample 31
Assembly 4
PubChem BioAssay 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Chaudhuri RR et al. (2010)
Chaudhuri, R.R., Sebaihia, M., Hobman, J.L., Webber, M.A., Leyton, D.L., Goldberg, M.D., Cunningham, A.F., Scott-Tucker, A., Ferguson, P.R., Thomas, C.M., Frankel, G., Tang, C.M., Dudley, E.G., Roberts, I.S., Rasko, D.A., Pallen, M.J., Parkhill, J., Nataro, J.P., Thomson, N.R., and Henderson, I.R. "Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042." PLoS One (2010) 5:e8801.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD: Go0001422 organism-specific Genomes On Line Database
646862322: Escherichia coli O44:H18 042 (EAEC) organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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