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Taxonomy browser (Pectobacterium atrosepticum)

Pectobacterium atrosepticum

Taxonomy ID: 29471 (for references in articles please use NCBI:txid29471)
current name
Pectobacterium atrosepticum (van Hall 1902) Gardan et al. 2003
type strain of Pectobacterium atrosepticum: ATCC:33260, CFBP:1526, CIP:105192, ICMP:1526, BCCM/LMG:2386, NCPPB:549, DSM:18077, personal::G/39, CECT:314, BCRC:13196, ICPB:EA172
homotypic synonym:
"Bacillus atrosepticus" van Hall 1902, effective name 1)
"Erwinia atroseptica" (van Hall 1902) Jennison 1923, effective name 2)
"Bacterium atrosepticum" (van Hall 1902) Lehmann and Neumann 1927, effective name 3)
"Pectobacterium atrosepticum" (van Hall 1902) Patel and Kulkarni 1951, effective name 4)
"Bacterium cartovorum var. atrosepticum" Hellmers and Dowson 1953, effective name 5)
"Pectobacterium carotovorum var. atrosepticum" Hellmers and Dowson 1957, effective name 6)
"Erwinia carotovora var. atroseptica" (Hellmers and Dowson 1953) Dye 1969, effective name 7)
Erwinia carotovora subsp. atroseptica (van Hall 1902) Dye 1969 (Approved Lists 1980), nom. approb. 8)
Pectobacterium carotovorum subsp. atrosepticum (van Hall 1902) Hauben et al. 1999
Erwinia caratovora subsp. atroseptica
Erwinia carotovora atroseptica
NCBI BLAST name: enterobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 3,762 2,862 236
Protein 60,483 49,933 -
Structure 42 14 -
Genome 1 1 -
Popset 87 87 -
Conserved Domains 2 2 -
GEO Datasets 51 18 -
PubMed Central 772 772 -
Gene 13,833 9,070 -
SRA Experiments 408 381 -
Protein Clusters 3,304 3,304 -
Identical Protein Groups 18,739 17,970 -
BioProject 36 23 -
BioSample 98 71 3
Assembly 24 21 -
PubChem BioAssay 5 5 -
Taxonomy 5 1 -


Comments and References:

Dye DW (1969)
Dye, D.W. "A taxonomic study of the genus Erwinia." N. Z. J. Sci. Technol. (1969) 12:223-236. [No PubMed record available.]
Gardan L et al. (2003)
Gardan, L., Gouy, C., Christen, R., and Samson, R. "Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. nov. and Pectobacterium wasabiae sp. nov." Int. J. Syst. Evol. Microbiol. (2003) 53:449-454.
Hauben L et al. (1998)
Hauben, L., Moore, E.R.B., Vauterin, L., Steenackers, M., Mergaert, J., Verdonck, L., and Swings, J. "Phylogenetic position of phytopathogens within the Enterobacteriaceae." Syst. Appl. Microbiol. (1998) 21:384-397.
Hellmers E & Dowson WJ (1953)
Hellmers E., and Dowson, W.J. "Further investigations of potato blackleg." Acta Agr. Scand. (1953) 3:103-112. [No PubMed record available.]
Jennison HM (1923)
Jennison, H.M. "Potato blackleg with special reference to the etiological agent." Ann. Rep. Mo. Bot. Gard. (1923) 10:1-72. [No PubMed record available.]
Lehmann KB & Neumann R (1927)
Lehmann, K.B., and Neumann, R. Bakteriologie insbesondere Bakteriologische Diagnostik. II. Allgmeine und spezielle Bakteriologie 7 Aufl. (1927) J.F. Lehmann, Munchen. [No PubMed record available.]
Patel MK & Kulkarni YS (1951)
Patel, M.K., and Kulkarni. Y.S. "Nomenclature of bacterial plant pathogens." Indian Phytopathol. (1951) 4:74-84. [No PubMed record available.]
Skerman VBD et al. (1980) (Erwinia carotovora subsp. atroseptica)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
VALIDATION LIST No. 68 (1999) (Pectobacterium carotovorum subsp. atrosepticum)
VALIDATION LIST No. 68. Int. J. Syst. Bacteriol. (1999) 49:1-3.
van Hall CJJ (1902)
van Hall, C.J.J. Bijdragen tot de kennis der Bakterieele Plantenziekten. Inaug. Diss. (1902), Amsterdam. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pectobacterium atrosepticum meta-databases BacDive
2 records from this provider organism-specific BioCyc
Erwinia carotovora subsp. atroseptica (van Hall 1902) Dye 1969 (Approved Lists 1980). taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Pectobacterium atrosepticum culture/stock collections Global Catalogue of Microorganisms
7 records from this provider organism-specific Integrated Microbial Genomes
Erwinia carotovora var. atroseptica taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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