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Taxonomy browser (Lactobacillus johnsonii)

Lactobacillus johnsonii

Taxonomy ID: 33959 (for references in articles please use NCBI:txid33959)
current name
Lactobacillus johnsonii Fujisawa et al. 1992
type strain of Lactobacillus johnsonii: ATCC:33200, CCUG:30725, CIP:103620, DSM:10533, JCM:2012, VPI:7960
includes:
Lactobacillus sp. 3DG
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( abbreviated )
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 127,261 126,504 221
Protein 124,307 111,466 -
Structure 10 10 -
Genome 1 1 -
Popset 67 67 -
Conserved Domains 1 1 -
GEO Datasets 92 91 -
PubMed Central 2,574 2,574 -
Gene 16,879 7,587 -
SRA Experiments 401 393 -
Protein Clusters 1,819 1,819 -
Identical Protein Groups 60,069 58,815 -
BioProject 151 141 -
BioSample 1,713 1,703 2
Assembly 965 955 -
PubChem BioAssay 4 4 -
Taxonomy 9 1 -

Comments and References:

image:Lactobacillus johnsonii
Fujisawa T et al. (1992)
Fujisawa, T., Benno, Y., Yaeshima, T., and Mitsuoka, T. "Taxonomic study of the Lactobacillus acidophilus group, with recognition of Lactobacillus gallinarum sp. nov. and Lactobacillus johnsonii sp. nov. and synonymy of Lactobacillus acidophilus group A3 (Johnson et al. 1980) with the type strain of Lactobacillus amylovorus (Nakamura 1981)." Int. J. Syst. Bacteriol. (1992) 42:487-491.
Falsen E et al. (1999) (reference with type strain information)
Falsen, E., Pascual, C., Sjoden, B., Ohlen, M., and Collins, M.D. "Phenotypic and phylogenetic characterization of a novel Lactobacillus species from human sources: description of Lactobacillus iners sp. nov." Int. J. Syst. Bacteriol. (1999) 49:217-221.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Lactobacillus johnsonii meta-databases BacDive
6 records from this provider organism-specific BioCyc
Lactobacillus johnsonii Fujisawa et al. 1992 taxonomy/phylogenetic Encyclopedia of life
GOLD: 12 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Lactobacillus johnsonii culture/stock collections Global Catalogue of Microorganisms
16 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Lactobacillus johnsonii | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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