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Taxonomy browser (Setaria viridis)

Setaria viridis

Taxonomy ID: 4556 (for references in articles please use NCBI:txid4556)
current name
Setaria viridis (L.) P.Beauv., 1812
NCBI BLAST name: monocots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
   Entrez records   
Database name Subtree links Direct links
Nucleotide 304,682 304,627
Protein 90,319 90,286
Genome 1 1
Popset 78 78
GEO Datasets 375 375
PubMed Central 1,161 1,161
Gene 34,251 34,251
SRA Experiments 1,679 1,679
Identical Protein Groups 55,874 55,861
BioProject 768 768
BioSample 1,868 1,868
Assembly 3 3
PubChem BioAssay 68 68
Taxonomy 7 1

Comments and References:

image:Setaria viridis
TROPICOS (Jan 02, 2014)
Name accessed on 2 January 2014 in: Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at:
Soreng RJ et al. 2003 & on
Soreng RJ, G Davidse, PM Peterson, FO Zuloaga, EJ Judziewicz, TS Filgueiras & O Morrone 2003 and onwards. On-line taxonomic novelties and updates, distributional additions and corrections, and editorial changes since the four published volumes of the Catalogue of New World Grasses (Poaceae) published in Contributions from the United States National Herbarium Vols. 39, 41, 46, and 48. Internet Catalogue of New World Grasses

Genome Information

Go to NCBI genomic BLAST page for Setaria viridis

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Setaria viridis taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Setaria viridis taxonomy/phylogenetic Barcodes of Life
Setaria viridis taxonomy/phylogenetic CalPhotos
dryaddb supplemental materials Dryad Digital Repository
563 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Setaria viridis (L.) Beauv. taxonomy/phylogenetic Integrated Taxonomic Information System
Setaria viridis taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Setaria viridis taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Setaria viridis ((L.) P.Beauv.) herbarium/museum collections PlantaeDB, University of Bucharest
4 records from this provider taxonomy/phylogenetic Plants of the World Online
4 records from this provider taxonomy/phylogenetic The International Plant Names Index
Setaria viridis taxonomy/phylogenetic TreeBase
4 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from provider organism-specific diArk - a resource for eukaryotic genome research
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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