Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Pneumocystis carinii)

Pneumocystis carinii

Taxonomy ID: 4754 (for references in articles please use NCBI:txid4754)
current name
Pneumocystis carinii P. Delanoë & Delanoë, 1912
equivalent:
Pneumocystis carinii f. sp. carinii
Pneumocystis carinii f. sp. ratti
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Pneumocystomycetes; Pneumocystales; Pneumocystaceae; Pneumocystis
   Entrez records   
Database name Subtree links Direct links
Nucleotide 8,369 4,552
Protein 7,912 606
Structure 28 27
Genome 1 1
Popset 10 10
GEO Datasets 33 33
PubMed Central 5,019 5,019
Gene 3,756 60
SRA Experiments 39 35
Identical Protein Groups 4,026 432
BioProject 13 9
BioSample 40 37
Assembly 1 -
PubChem BioAssay 286 286
Taxonomy 10 1

Genome Information

Go to NCBI genomic BLAST page for Pneumocystis carinii

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pneumocystis carinii taxonomy taxonomy/phylogenetic Arctos Specimen Database
dryaddb supplemental materials Dryad Digital Repository
GOLD: Go0002670 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Pneumocystis carinii P. Delanoe & Delanoe 1912 taxonomy/phylogenetic Index Fungorum
Pneumocystis carinii P. Delanoe & Delanoe taxonomy/phylogenetic MycoBank
fungal-I (genome proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
Sanger companies/research institutes The Sanger Centre
Pneumocystis carinii taxonomy/phylogenetic TreeBase
WebScipio: Pneumocystis carinii organism-specific WebScipio - eukaryotic gene identification
diArk: Pneumocystis carinii organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
95-18-8B [1 1 1] 98-17-2 [1 1 1] ATCC 50385 [1 1 1] ATCC PRA-159 [3 3]
ATCC:PRA-159 [3 3] B80 [2 1 3778 1 7295 2] C.B-17 scid/scid mouse-derived Pneumocystis carinii [2 2] Form 1 [1 1]
Form 6 [1 1] IMS-PcR84 [1 1] PD14 [2] PDB5182-11 [1 1]
PDB5182-2 [1 1] PDB5182-9 [1 1] PDB5182/11 [1 1] PDB5182/2 [1 1]
PDB5182/9 [1 1] Pneumocystis carinii carinii [1] Pneumocystis carinii f. sp. carinii [2 17] Rat [3 3]
Rat-derived [1 1] Type I [2 1] Type II [1] Type III [1]
Type IV [1] ferret-derived P. carinii [1 1] genomic lambda gt11 library 36B6 of T.R. Garbe [1 1] prototype [4 4]
prototype form 1 [12 12] rattus [1] variant [2 2]
isolate
1507CI [1 1 1] 3 [1] 31RD [1 1] 425 [1]
50RD [1 1] 67RD [1 1] 68RF [1 1] 74RD [1 1]
751MG [1 1 1] 779MG [1 1 1] 794MG [1 1 1] 804MG [1 1 1]
805MG [1 1 1] 806MG [1 1 1] 808MG [1 1 1] 823MG [1 1 1]
858MG [1 1 1] 888MG [1 1 1] 891MG [1 1 1] 91RD [1 1]
922MG [1 1 1] 93RF [1 1] 944MG [1 1 1] 946MG [1 1 1]
952MG [1 1 1] 982MG [1 1 1] AR 11 [1] AR 15 [1]
AR 18 [1] AR 33 [2] CV 701 [1] CV 703 [1]
FER1 [1] GJ_2020_59 [1] GJ_2021_13 [1] GJ_2021_3 [1]
GJ_2021_4 [1] GJ_2021_48 [1] GJ_2021_8 [1] IQS1 [1 1]
IQS2 [1 1] IQS3 [1 1] IQS4 [1 1] IQS5 [1 1]
Ir-razi sp-dw [1] Iss [1] L42 [1] Lung of canis lupus familiaris [1]
PC1; PC85 [1] PC98179 [1 1] PC98180-2 [1 1] PC98182-2 [1 1]
PC99056 [1 1] PCcytbmut1 [1 1] PCcytbmut2 [1 1] PCcytbwt [1 1]
PJ1 [1 1] PN_POA_56 [1] PN_POA_59 [1] PP_CBA_46 [1]
PP_CBA_50 [1] PP_CBA_64 [1] PP_CBA_69 [1] PP_POA_38 [1]
PP_POA_61 [1] PP_POA_65 [1] Pcar_B70_1_UCS [1 1] Pcar_B70_2_UCS [1 1]
Pcar_UC_1 [1 1] Pcar_UC_2 [1 1] PoPc 9/3 [1 1] S42 [1]
form 1 [2] form 2 [2] form 3 [2] form 4 [2]
from infected ferret lung [2 2] patient 12 [1]
nat-host
Rattus norvegicus [9] rat [6]
forma-specialis
carinii [29 1 40]
culture-collection
ATCC:PRA-159 [3 3]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]