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Taxonomy browser (Schizosaccharomyces pombe)

Schizosaccharomyces pombe

Taxonomy ID: 4896 (for references in articles please use NCBI:txid4896)
current name
Schizosaccharomyces pombe Lindner, 1893
type material of Schizosaccharomyces pombe: CBS:356, BCRC:21461, DBVPG:6277, JCM:8274, MUCL:30245, NRRL:Y-12796
Genbank common name: fission yeast
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Schizosaccharomyces malidevorans
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 234,512 234,324 24
Protein 22,171 15,963 -
Structure 491 255 -
Genome 1 1 -
Popset 23 23 -
Conserved Domains 5 1 -
GEO Datasets 12,135 12,061 -
PubMed Central 22,488 22,488 -
Gene 13,212 7,139 -
HomoloGene 2,739 2,739 -
SRA Experiments 15,900 15,538 -
GEO Profiles 81,684 81,684 -
Identical Protein Groups 7,012 6,756 -
BioProject 928 896 -
BioSample 19,654 19,297 1
Assembly 26 26 -
PubChem BioAssay 128 125 -
Taxonomy 10 1 -

Genome Information

Go to NCBI genomic BLAST page for Schizosaccharomyces pombe

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
dryaddb supplemental materials Dryad Digital Repository
Schizosaccharomyces malidevorans Rankine & Forn. 1964 taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Schizosaccharomyces pombe culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Index Fungorum
Schizosaccharomyces pombe taxonomy/phylogenetic Lifemap
2 records from this provider taxonomy/phylogenetic MycoBank
Schizosaccharomyces pombe taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Sanger companies/research institutes The Sanger Centre
Schizosaccharomyces pombe taxonomy/phylogenetic TreeBase
WebScipio: Schizosaccharomyces pombe organism-specific WebScipio - eukaryotic gene identification
diArk: Schizosaccharomyces pombe organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
12C-5Y8 [1] 1913 [1 2] 1972h- [2] 2.1459 [1 2]
2.274 [1 1] 31 [1] 358 [2 4] 4.5.06 [1]
557 [1 2] 912 [1 1 2 2] 968 [10 3 3 17] 968 h90 [3 253 252]
972 [4 175 166 8341 5368 88 123] 972 (h-) [2 408 36 79 139 2] 972 H+ [2 408 36 79 139 2] 972 derivative [1 1]
972 h [2 408 36 79 139 2] 972 h minus [1 1] 972 h- [2 408 36 79 139 2] 972 h-s [1 1]
972- [4 175 166 8341 5368 88 123] 972/975 [2 2] 972; ATCC38366 [1 1] 972; SP175 [31]
972L [1 1] 972h [6 3056 34 6889 10440 2990] 972h(-) [6 3056 34 6889 10440 2990] 972h- [6 3056 34 6889 10440 2990]
972h-minus [5] 975 [1] 975h+ [2 2] A [2 5 1]
AC1 [1 2] ARC039 [1 2] ATCC 16979 [108 2 178] ATCC 96530 [1]
ATCC 98676 [1 2 1] B [1 1] BAP1 [2 6] BY-10 [1]
C [1] CBS356 [1] CBS5557 [2 33 34 5] CD16-1 [105 44]
CHFY0201 [1] CICC1056 [1] CLI 1079 [1 1] CRL152 [1 2]
D.No. NCYC 3748 [1] D18 [4 5 1 3] DAOM 216363 [3 1 1] DSM 70576 [1 1]
DX7706-2 [1 1] EBC7 [1 1 2 1] ED665 [1 3] ED665h- [1 1]
EF1 [4 10] EF2 [2 3] EG355 [1 3] Eg 355 [1 1]
FBKL2.9SP-L14 [1] FBKL2.9SP-L24 [1] FLO-DUT [1 3 4 5] FN41 [1 1]
FY11429 [1 2 1] FY12077 [1 2 1] FY254 [2 4] FY28974 [1 4 1 4 1]
FY28989 [1 4 1 4 1] FY29030 [1 4 1 4 1] FY29033 [2 38 1 40 2] G40-2-10-2 [1]
G72h- [1 1] HBUAS61108 [1] HBUAS61121 [1] HBUAS61122 [1]
HBUAS61177 [1] HKM-1269 [1 1 14 1] HKM-35 [1 7 1] HM123 [6 7 5 6]
IFO 0346 [1 1] IFO 0354 [2 2] IFO 1628 [1] IFO1608 [1]
J227 [1 2] JB1110 [2 5 1 4 2] JB1117 [1 4 1 4 1] JB1154 [1 4 1 4 1]
JB1171 [4 5 1 4 4] JB1174 [2 5 1 4 4] JB1197 [2 5 1 4 3] JB1205 [2 5 1 4 4]
JB1206 [2 5 1 4 2] JB1207 [1 4 1 4 1] JB22 [273 1 5] JB4 [1 1 1]
JB758 [4 1 4] JB760 [1 5 1 4 2] JB762 [4 1 4] JB837 [4 1 4]
JB838 [4 1 4] JB840 [4 1 4] JB841 [4 1 4] JB842 [1 5 1 4 1]
JB845 [4 1 4] JB848 [4 1 4] JB852 [4 1 4] JB853 [1 5 1 4 1]
JB854 [4 1 4] JB858 [1 5 1 4 2] JB862 [4 1 4] JB869 [4 1 4]
JB870 [4 1 4] JB871 [4 1 4] JB872 [1 1 1] JB873 [1 5 1 4 2]
JB874 [4 1 4] JB875 [4 1 4] JB878 [4 1 4] JB879 [4 1 4]
JB884 [4 1 4] JB899 [4 1 4] JB900 [4 1 4] JB902 [4 1 4]
JB910 [4 1 4] JB912 [4 1 4] JB914 [4 1 4] JB917 [4 1 4]
JB918 [1 5 1 4 1] JB929 [4 1 4] JB930 [4 1 4] JB931 [1 4 1 4 1]
JB934 [1 5 1 4 2] JB938 [4 1 4] JB939 [1 5 1 4 1] JB942 [4 1 4]
JB943 [4 1 4] JB953 [4 1 4] JNC-11 [1] JS21 [1 1]
JY2 [1 2] JY265 [2 3] JY274 [5 5] JY333 [1 8 4 7 11]
JY336 [1 2] JY450 [15 18 2 5 15] JY741 [13 25] JY746 [1 131 1]
JZ344 [1 1] JZ348 [1 1] KCTC 7522 [1] KP1 [2 2]
KRT29 [1] L0442 [1] L0443 [1] L968 [11 101083 4 10]
L968 h90 [1 1] L972 [17 20 113579 28 16] L972 (FY12697) [2 2] L972 h- [6 6]
L972h- [1 1] L975 [2 2] LBMAE-JZ-Y5 [1 1] LM102 [2 3]
MUCL 30245 [1] NA-Y2 [1] NCYC 132 [1 1] ND080 [1 2]
NFRI 3807 [1] NRRL Y-12796 [21 12 7] NT027 [1] OTG001 [1]
PR745 [188 369] S.pombe 972 [1 1] S.pombe SP401 [1 1] SBP74-3 [1]
SP100 [12] SP1000 [1] SP223 [2 7] SP225 [1]
SP557 [1 2] SP66 [6 12] SP808 [1 4] SP972 [22 23 7 7 22]
SPB287 [1 13 1] SPB80 [3 18 3] SPB81 [2 15 2] SPQ-01 [4 1 2]
ST4932 [1] ST5057 [2] ST5058 [2] ST5059 [1]
ST5060 [1] ST5346 [1] ST5349 [1] ST5350 [1]
Sp 223 [2 2] Stratagene SpQ01 [1 1] THR01 [1 1] TP4-1D [1 2]
TV270 [72] TV293 [98] TY741 [1 2] UCDFST:04-213 [2 2]
UCDFST:40-277 [1 1] UCDFST:65-116 [2 2] UCDFST:70-49 [2 2] UPMSP-936 [1]
UoA399 [3 3] V1 [1] V2 [1] WFC-SP-48 [1]
YE1 [1] YHL663 [1] YHL665 [1] ad7-50h-. [1]
ade7-50h- [2] caf1-21 [1 4] car1 [1 1] dis3-54,D171N [1 2 1]
fas2/lsd1-H201 [1 1] fas2/lsd1-H265 [1 1] fas2/lsd1-H518 [1 1] from 927h- [1 1]
h(-), haploid [2] h- 972 [4 23 13] h-972 [4 23 13] h-SUP3-e Ade6-704 [1]
h-ura4-294 [1 1] h90 [1 5 9] malidevorans [1 1] sep1-1 [1 1]
sp 813 [1 1] sp 972 [1 1] sp.011 [4 4] sp.011; from Murray et al. Nucleic Acids Res. 19:3525-3513 (1991) [1 1]
sp011 [2 11] spl1 [1] strain 972h- [1 1] ts mutant nuc2-663 [1 1]
wild type [75 116 6 6 86] wild type (972h-) [1 1] wild type + ago1D580A [1 2] wild type 972 h minus [1 1]
wild-type [75 116 6 6 86] wild-type strain h-972 [1 1] wildtype 972 h minus [1 1] wt972 and wt975 [1 1]
type
type strain of Schizosaccharomyces pombe [2 1]
variety
wild type strain wild type [75 116 6 6 86]
isolate
17 [3 2 2 1 3] 17SS [1] CLI 1085 [1 1] DR2 [1]
ED616 [2 2] G101 [1 1] HO-LUC-KanMX6 [1 5] K1 [1]
K10 [1] K11 [1] K12 [1] K13 [1]
K14 [1] K15 [1] K16 [1] K17 [1]
K18 [1] K19 [1] K2 [1] K20 [1]
K21 [1] K22 [1] K23 [1] K24 [1]
K25 [1] K26 [1] K27 [1] K28 [1]
K29 [1] K3 [1] K4 [1] K5 [1]
K6 [1] K7 [1] K8 [1] K9 [1]
KGT162 [1] LDK-N4 [1] MN [1] MT1 [1 11]
MT10 [1 11] MT11 [1 11] MT12 [1 11] MT13 [1 11]
MT14 [1 10] MT15 [1 13] MT16 [1 12] MT17 [1 11]
MT18 [1 11] MT19 [1 10] MT2 [1 11] MT20 [1 12]
MT21 [1 11] MT22 [1 12] MT23 [1 11] MT24 [1 12]
MT25 [1 11] MT26 [1 11] MT27 [1 12] MT28 [1 11]
MT29 [1 12] MT3 [1 11] MT30 [1 10] MT31 [1 12]
MT32 [1 10] MT33 [1 11] MT34 [1 12] MT35 [1 11]
MT36 [1 11] MT37 [1 10] MT38 [1 11] MT39 [1 12]
MT4 [1 11] MT40 [1 11] MT41 [1 12] MT42 [1 12]
MT43 [1 12] MT44 [1 12] MT45 [1 10] MT46 [1 12]
MT47 [1 10] MT48 [1 10] MT49 [1 10] MT5 [1 11]
MT50 [1 10] MT51 [1 10] MT52 [1 10] MT53 [1 10]
MT54 [1 10] MT55 [1 12] MT56 [1 10] MT57 [1 13]
MT58 [1 13] MT59 [1 13] MT6 [1 11] MT60 [1 11]
MT61 [1 12] MT62 [1 12] MT63 [1 14] MT64 [1 10]
MT65 [1 10] MT66 [1 10] MT67 [1 9] MT68 [1 11]
MT69 [1 11] MT7 [1 13] MT8 [1 11] MT9 [1 11]
OTU0140 [1] OTU0318 [1] OTU0960 [1] OTU1045 [1]
SS_16_LS016_CO [1] SS_17_LS017_CO [1] SS_18_LS018_CO [1] SS_19_LS019_CO [1]
SS_20_LS020_CO [1] SS_22_LS022_CO [1] Ts54 [1 1] Ts99 [1 1]
p86 [1 1] wine [1]
nat-host
Homo sapiens [1]
specimen-voucher
DAO:216363 [2] KP1 [1 1]
culture-collection
ATCC:16979 [1 2] ATCC:96530 [1] ATCC:98676 [1 1] CBS:1062 [2 2]
IHEM:03960 [1]


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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