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Taxonomy browser (Arabis alpina)

Arabis alpina

Taxonomy ID: 50452 (for references in articles please use NCBI:txid50452)
current name
Arabis alpina L., 1753
Genbank common name: gray rockcress
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name(s) alpine rockcress
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
   Entrez records   
Database name Direct links
Nucleotide 28,130
Protein 23,703
Genome 1
Popset 58
GEO Datasets 196
PubMed Central 416
Gene 184
SRA Experiments 1,073
Identical Protein Groups 23,465
BioProject 41
BioSample 1,114
Assembly 4
Taxonomy 1

Comments and References:

Flora Europaea
Name verified on date of entry into taxonomy database in: Flora Europaea, Royal Botanic Garden Edinburgh (RBGE), Inverleith Row, Edinburgh, EH3 5LR, United Kingdom.
GRIN taxonomy
Name verified on date of entry into database in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.
FNA - Arabis
Shehbaz IA. 2009. Arabis Linnaeus, Sp. Pl. 2: 664. 1753; Gen. Pl. ed. 5, 298. 1754. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Vol. 7: Magnoliophyta: Salicaceae to Brassicaceae. New York and Oxford. On-line version.
Euro+Med Plantbase
Name verified on date of entry into database in: The Euro+Med Plantbase - the information resource for Euro-Mediterranean plant diversity. W. Greuter (Ed.) Botanic Garden and Botanical Museum Berlin-Dahlem.

Genome Information

Go to NCBI genomic BLAST page for Arabis alpina

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Arabis alpina taxonomy taxonomy/phylogenetic Arctos Specimen Database
4 records from this provider supplemental materials Dryad Digital Repository
Arabis alpina L. taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Arabis alpina L. taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Arabis alpina taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Arabis alpina (L.) herbarium/museum collections PlantaeDB, University of Bucharest
Arabis alpina taxonomy/phylogenetic Plants of the World Online
Arabis alpina taxonomy/phylogenetic The International Plant Names Index
Arabis alpina L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Arabis alpina organism-specific WebScipio - eukaryotic gene identification
diArk: Arabis alpina organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
cultivar
Pajares [2 22 47 27788 23286 26]
isolate
72 [1] 73 [1] 74 [1] 75 [1]
A-Kili [6 6 3] A31M [3 3] Aa1apet3 [1 1] Aa2apet3 [1 1]
Aalp1 [1 1 1] Aalp1-1 [1 1 1] Aalp1-2 [1 1 1] Aalp1-3 [1 1 1]
Aalp1-4 [1 1 1] Aalp2 [1 1 1] AalpEU [1 1 1] AlpAF [1 1 1]
CK1 [3 3 2] F002_08 [1 1] F043_01 [1 1] H01 [3 3]
KoF02 [1 1] MA001 [3 3] MA004 [1 3] Pajares [1 1 1]
RK001 [3 3] RK001b [3 3] RK002 [3 3] RK229 [3 3]
RK235 [3 3] RK296 [3] S075_03 [1 1] T107 [3 1]
TZWR_2006124 [1 1] TZWR_2011495 [1 1] TZWR_2046773 [1 1] combined plant samples Arabis alpina Aal05 and Aal19 [1 1]
type01 [1 1] type02 [1 1] type03 [1 1] type04 [1 1]
type05 [1 1] type06 [1 1] type07 [1 1] type08 [1 1]
type09 [1 1] type10 [1 1] type11 [1 1] type12 [1 1]
type13 [1 1] type14 [1 1] type16 [1 1] type17 [1 1]
type18 [1 1] type19 [1 1] type20 [1 1] type21 [1 1]
type22 [1 1] type23 [1 1] type24 [1 1] type25 [1 1]
type26 [1 1] type27 [1 1] type28 [1 1] type29 [1 1]
type30 [1 1] type31 [1 1] type32 [1 1] type33 [1 1]
type34 [1 1] type35 [1 1] type36 [1 1] type37 [1 1]
type38 [1 1] type39 [1 1] type40 [1 1] type41 [1 1]
type42 [1 1] type43 [1 1] type44 [1 1] type45 [1 1]
type46 [1 1] type47 [1 1] type48 [1 1] type49 [1 1]
type5 [1 1] type50 [1 1] type51 [1 1] type52 [1 1]
type53 [1 1] type54 [1 1] type55 [1 1] type56 [1 1]
type57 [1 1] type58 [1 1] type60 [1 1] type61 [1 1]
type62 [1 1] type63 [1 1] type64 [1 1] type65 [1 1]
type66 [1 1] type67 [1 1] type68 [1 1] type69 [1 1]
type70 [1 1] type71 [1 1] typeA [1 1] typeB [1 1]
typeC [1 1] typeD [1 1] typeE [1 1] typeF [1 1]
typeG [1 1] typeH [1 1] typeI [1 1] typeK [1 1]
typeL [1 1] typeM [1 1]
specimen-voucher
09PROBE-05914 [3 2] 09PROBE-05915 [3 2] Aiken_04-024_CAN [2 2] B:N. Boehling, 14597, 28.05.2008 [3]
Botanic Garden Bayreuth [1 1] Consaul_3529_CAN [2 2] Gillespie_6759_CAN [2 2] Gillett_16863_CAN [2 2]
HEID:109656 [5 5 2] HEID:406774; R. Karl, s.n., 22.06.2010 [3 3] HEID:809871; A. Landau, s.n., 00.00.2010 [3 3] HEID:809881 [2 2 1]
Jacobs_sn_CAN517728 [1 1] MA J. Fernandez Casas 3033 [MA-224236] [1 1] NMW7322 [3 2] NMW7323 [3 2]
NMW7324 [3 2] Neuffer, Hurka/OSBU6814 [1 1] O'Kane & Dihoru 3618 (MO) [1 1] PL-GV2 [2 1]
RBGE150 [3 2] RBGE151 [3 2] Resetnik (ZA) [3 1] UQU AP22A [3 2 2]
UQU AP22B [3 2 2] UQU AP23A [3 2 2] UQU AP23B [3 2 2] UQU AP24A [3 2 2]
UQU AP24B [3 2 2]
ecotype
GAL [2 5] PIC [2 6] Pajares [84 3 9 106] S4-a [2 6]
S4-b [2 6] tanza [2 5]
bio-material
seed accession Cza [2 3] seed accession Dor [3 4] seed accession Mug [1 1] seed accession Tot [2 2]
seed accession Wca [1 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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