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Taxonomy browser (Cryptococcus neoformans)

Cryptococcus neoformans

Taxonomy ID: 5207 (for references in articles please use NCBI:txid5207)
current name
Cryptococcus neoformans (San Felice) Vuill. 1901
basionym:
Saccharomyces neoformans San Felice, 1895
type material of Saccharomyces neoformans: ATCC:32045, BCRC:20528, DBVPG:6010, IFO:0608, IGC:3957, NRRL:Y-2534, NRRL:Y-8347, UM:161
homotypic synonym:
Blastomyces neoformans
Debaryomyces neoformans
Lipomyces neoformans
Torula neoformans
Torulopsis neoformans
NCBI BLAST name: basidiomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Filobasidiella neoformans
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 136,731 14,838 9,217
Protein 347,509 16,275 -
Structure 91 29 -
Genome 1 1 -
Popset 380 300 -
Conserved Domains 1 1 -
GEO Datasets 4,107 1,786 -
PubMed Central 17,210 17,196 -
Gene 22,142 1 -
SRA Experiments 9,273 3,392 -
Identical Protein Groups 95,543 7,023 -
BioProject 759 137 -
BioSample 9,496 4,110 802
Assembly 182 87 3
PubChem BioAssay 1,866 1,773 -
Taxonomy 452 1 -

Comments and References:

image:Cryptococcus neoformans
Kwon-Chung et al. (2017), doi:10.1128/mSphere.00357-16
Kwon-Chung K.J. et al. 2017. The Case for Adopting the “Species Complex” Nomenclature for the Etiologic Agents of Cryptococcosis. mSphere.

Genome Information

Go to NCBI genomic BLAST page for Cryptococcus neoformans
Genome view: 14 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Cryptococcus neoformans (San Felice) Vuill. 1901 taxonomy/phylogenetic Encyclopedia of life
Filobasidiella neoformans culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2 records from this provider taxonomy/phylogenetic Index Fungorum
Cryptococcus neoformans (Sanfelice) Vuillemin taxonomy/phylogenetic Integrated Taxonomic Information System
Cryptococcus neoformans taxonomy/phylogenetic Lifemap
2 records from this provider taxonomy/phylogenetic MycoBank
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Filobasidiella neoformans taxonomy/phylogenetic TreeBase
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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