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Taxonomy browser (Fusarium oxysporum)

Fusarium oxysporum

Taxonomy ID: 5507 (for references in articles please use NCBI:txid5507)
current name
Fusarium oxysporum Schltdl., 1824
epitype of Fusarium oxysporum: CBS:H-23620
culture from epitype of Fusarium oxysporum: CBS:144134
Fusarium sp. Fox56
Fusarium sp. Fox59
Fusarium sp. GIFUUTR5
Fusarium sp. PDBC NPFu1
Fusarium sp. PDBC NPFu2
Fusarium sp. PDBC NPFu3
Trichoderma sp. CDR2P2F1
fungal sp. ZZF51
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 129,787 37,201 5
Protein 1,103,810 361,908 -
Structure 78 72 -
Genome 1 1 -
Popset 1,646 1,374 -
GEO Datasets 198 105 -
PubMed Central 12,078 12,069 -
Gene 43,848 43 -
SRA Experiments 2,148 1,081 -
Identical Protein Groups 484,336 199,144 -
BioProject 334 181 -
BioSample 2,122 1,147 -
Assembly 773 424 -
PubChem BioAssay 498 414 -
Taxonomy 147 1 -

Comments and References:

image:Fusarium oxysporum
Lombard et al. (2018), doi:10.3767/persoonia.2019.43.01
Lombard L. et al. 2018. Epitypification of Fusarium oxysporum - clearing the taxonomic chaos. Persoonia 43:1-47.

Genome Information

Go to NCBI genomic BLAST page for Fusarium oxysporum

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
6 records from this provider organism-specific Genomes On Line Database
Fusarium oxysporum culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Index Fungorum
Fusarium oxysporum Schlechtendal taxonomy/phylogenetic MycoBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Fusarium oxysporum Schltdl., 1824 taxonomy/phylogenetic Ocean Biogeographic Information System
Fusarium oxysporum taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Fusarium oxysporum taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
Fusarium oxysporum Schltdl., 1824 taxonomy/phylogenetic World Register of Marine Species
10 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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