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Taxonomy browser (Arabidopsis lyrata)

Arabidopsis lyrata

Taxonomy ID: 59689 (for references in articles please use NCBI:txid59689)
current name
Arabidopsis lyrata (L.) O'Kane & Al-Shehbaz, 1997
basionym:
Arabis lyrata L., 1753
homotypic synonym:
Cardaminopsis lyrata (L.) Hiitonen, 1950
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name(s) lyrate rockcress
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
   Entrez records   
Database name Subtree links Direct links
Nucleotide 137,290 64,288
Protein 129,688 32,266
Popset 634 547
GEO Datasets 221 139
PubMed Central 2,118 2,108
Gene 39,890 189
SRA Experiments 2,668 1,867
Protein Clusters 19,450 -
Identical Protein Groups 64,121 30,827
BioProject 85 53
BioSample 2,097 1,416
Datasets Genome 6 1
Taxonomy 5 1

Comments and References:

image:Arabidopsis lyrata
O'Kane M & Al-Shehbaz IA 1997
O'Kane SL, Jr. and Al-Shehbaz IH. 1997. A synopsis of Arabidopsis (Brassicaceae). Novon 7: 323-327.
FNA - Arabidopsis
Al-Shehbaz IA. 2009. Arabidopsis (de Candolle) Heynhold in F. Holl and G. Heynhold, Fl. Sachsen. 1: 538. 1842. [name conserved]. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Vol. 7: Magnoliophyta: Salicaceae to Brassicaceae. New York and Oxford. On-line version.

Genome Information

Go to NCBI genomic BLAST page for Arabidopsis lyrata
Genome view: 8 chromosomes
Names 1 2 3 4 5 6 7 8

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
3 records from this provider taxonomy/phylogenetic Arctos Specimen Database
2 records from this provider supplemental materials Dryad Digital Repository
Arabidopsis lyrata taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0017639 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2614208501: Arabidopsis lyrata (version 2) organism-specific Integrated Microbial Genomes
Arabidopsis lyrata taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Arabidopsis lyrata ((L.) O'Kane & Al-Shehbaz) herbarium/museum collections PlantaeDB, University of Bucharest
Arabidopsis lyrata taxonomy/phylogenetic Plants of the World Online
Arabidopsis lyrata taxonomy/phylogenetic The International Plant Names Index
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Arabidopsis lyrata organism-specific WebScipio - eukaryotic gene identification
diArk: Arabidopsis lyrata organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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