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ASM83029v1

Organism name:
archaeon GW2011_AR15 (archaea)
Taxonomy check:
Inconclusive
BioSample:
SAMN03217309
BioProject:
PRJNA268032
Submitter:
Banfield Lab, University of California, Berkeley
Date:
2015/01/29
Assembly type:
na
Assembly level:
Chromosome
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_000830295.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
idba_ud v. Oct-2011
Genome coverage:
15x
Sequencing technology:
Illumina HiSeq

IDs: 248861 [UID] 1506988 [GenBank]

See Genome Information for archaeon GW2011_AR15

Pathogen Detection Resources

History (Show revision history)

Comment

RNA annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Global statistics

Total sequence length1,157,790
Total ungapped length1,157,690
Gaps between scaffolds0
Number of scaffolds1
Scaffold N501,157,790
Scaffold L501
Number of contigs1
Contig N501,157,690
Contig L501
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)1

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_000830305.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP010425.1n/an/a

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
Chromosome 1,157,79011,157,6901,157,79010

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
archaeon GW2011_AR15archaeon GW2011_AR15

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana