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T7_ISS37_r1.0

Organism name:
Trichinella nelsoni (nematodes)
Isolate:
ISS37
BioSample:
SAMN02949482
BioProject:
PRJNA257433
Submitter:
University of Melbourne
Date:
2015/11/24
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001447455.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JYDL01
Assembly method:
SPAdes v. 2.5
Expected final version:
yes
Genome coverage:
232x
Sequencing technology:
Illumina

IDs: 585251 [UID] 2693318 [GenBank]

See Genome Information for Trichinella nelsoni

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length47,436,005
Total ungapped length47,223,767
Gaps between scaffolds0
Number of scaffolds2,969
Scaffold N50293,867
Scaffold L5050
Number of contigs3,368
Contig N50141,065
Contig L5095
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,969

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced47,436,0052,96947,223,767293,8673990