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Burkholderiales bacterium Ga0077547

Organism name:
Burkholderiales bacterium Ga0077547 (b-proteobacteria)
Taxonomy check:
Inconclusive
Isolate:
Ga0077547
BioSample:
SAMN04254518
BioProject:
PRJNA301005
Submitter:
University of Glasgow
Date:
2015/12/09
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_001464195.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LNEY01
Assembly method:
Idba_ud v. 1.1.1
Expected final version:
yes
Genome coverage:
34.0x
Sequencing technology:
Illumina HiSeq

IDs: 593631 [UID] 2720098 [GenBank]

See Genome Information for Burkholderiales bacterium Ga0077547

History (Show revision history)

Comment

Global statistics

Total sequence length2,843,259
Total ungapped length2,843,259
Number of contigs33
Contig N50105,709
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)33

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,843,259332,843,259105,70900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Burkholderiales bacterium Ga0077547Burkholderiales bacterium Ga0077547

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_007994965.1Piscinibacter aquaticustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type81.6518.8711.75

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-lineage-matchna