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ASM162692v1

  • Anomalous assembly.
Organism name:
Moraxellaceae bacterium REDSEA-S32_B1 (g-proteobacteria)
Taxonomy check:
Failed
Isolate:
REDSEA-S32_B1
BioSample:
SAMN04534593
BioProject:
PRJNA289734
Submitter:
King Abdullah University of Science and Technology
Date:
2016/04/22
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Assembly anomaly:
unverified source organism
Excluded from RefSeq:
  • unverified source organism
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_001626925.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LUOR01
Assembly method:
IDBA-UD v. 1.1.1
Expected final version:
no
Genome coverage:
50.0x
Sequencing technology:
Illumina HiSeq

IDs: 728661 [UID] 3203188 [GenBank]

History (Show revision history)

Comment

Global statistics

Total sequence length2,384,854
Total ungapped length2,384,854
Number of contigs80
Contig N5049,781
Contig L5017
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)80

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,384,854802,384,85449,78100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Moraxellaceae bacterium REDSEA-S32_B1Moraxellaceae bacterium REDSEA-S32_B1

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022601685.1Acinetobacter sedimentitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type90.4281.5177.40

ANI result

Taxonomy check statusBest match statusComment
Failedbelow-threshold-mismatchna