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ASM206885v1

Organism name:
Betaproteobacteria bacterium ADurb.Bin341 (b-proteobacteria)
Taxonomy check:
Inconclusive
Isolate:
ADurb.Bin341
BioSample:
SAMN05004180
BioProject:
PRJNA321808
Submitter:
University of Illinois
Date:
2017/03/22
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002068855.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
MWBA01
Assembly method:
SPAdes v. 3.6.2
Expected final version:
yes
Genome coverage:
4.8x
Sequencing technology:
Illumina HiSeq

IDs: 1052211 [UID] 4292208 [GenBank]

See Genome Information for Betaproteobacteria bacterium ADurb.Bin341

History (Show revision history)

Comment

Source DNA available from corresponding author Professor Wen-Tso Liu at the University of Illinois 205 N. Mathews Ave, Urbana, IL 61801 USA

Global statistics

Total sequence length3,478,820
Total ungapped length3,478,820
Number of contigs486
Contig N5013,256
Contig L5077
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)486

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,478,8204863,478,82013,25600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Betaproteobacteria bacterium ADurb.Bin341Betaproteobacteria bacterium ADurb.Bin341

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_002872475.1Pseudazoarcus pumilustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type85.091.071.14

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena