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ASM232738v1

Organism name:
Caldiserica bacterium UBA2182 (bacteria)
Taxonomy check:
Inconclusive
Isolate:
UBA2182
BioSample:
SAMN06452572
BioProject:
PRJNA348753
Submitter:
University of Queensland
Date:
2017/09/21
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002327385.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
DCVS01
Assembly method:
CLC de novo assembler v. 4.4.1
Expected final version:
yes
Genome coverage:
205.14x
Sequencing technology:
Illumina

IDs: 1212091 [UID] 5049128 [GenBank]

See Genome Information for Caldiserica bacterium UBA2182

History (Show revision history)

Comment

Global statistics

Total sequence length1,086,095
Total ungapped length1,085,532
Gaps between scaffolds0
Number of scaffolds27
Scaffold N5063,331
Scaffold L507
Number of contigs38
Contig N5052,601
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)27

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,086,095271,085,53263,331110

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Caldiserica bacterium UBA2182Caldiserica bacterium UBA2182

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000284335.1Caldisericum exiletype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type83.910.830.57

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena