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ASM232819v1

Organism name:
Acidobacteria bacterium UBA2167 (bacteria)
Taxonomy check:
Inconclusive
Isolate:
UBA2167
BioSample:
SAMN06450833
BioProject:
PRJNA348753
Submitter:
University of Queensland
Date:
2017/09/21
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002328195.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
DCWH01
Assembly method:
CLC de novo assembler v. 4.4.1
Expected final version:
yes
Genome coverage:
16.18x
Sequencing technology:
Illumina

IDs: 1212501 [UID] 5049948 [GenBank]

See Genome Information for Acidobacteria bacterium UBA2167

History (Show revision history)

Comment

Global statistics

Total sequence length3,314,426
Total ungapped length3,272,427
Gaps between scaffolds0
Number of scaffolds257
Scaffold N5024,918
Scaffold L5040
Number of contigs382
Contig N5018,006
Contig L5051
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)257

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,314,4262573,272,42724,9181250

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acidobacteria bacterium UBA2167Acidobacteria bacterium UBA2167

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_009827635.1Parapontixanthobacter aurantiacustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.670.190.21

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena