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Spur_5.0

Organism name:
Strongylocentrotus purpuratus (purple sea urchin)
Isolate:
Spur 01
Sex:
male
BioSample:
SAMN00829422
BioProject:
PRJNA10736
Submitter:
Baylor College of Medicine
Date:
2019/09/06
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000002235.4 (latest)
RefSeq assembly accession:
GCF_000002235.5 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
AAGJ06
Assembly method:
Canu v. 1.8
Expected final version:
yes
Genome coverage:
123.0x
Sequencing technology:
PacBio Sequel

IDs: 4536931 [UID] 13654338 [GenBank] 13759658 [RefSeq]

See Genome Information for Strongylocentrotus purpuratus

History (Show revision history)

Comment

Global statistics

Total sequence length921,855,793
Total ungapped length921,518,293
Gaps between scaffolds0
Number of scaffolds871
Scaffold N5037,282,239
Scaffold L5011
Number of contigs1,546
Contig N502,052,140
Contig L50139
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)871

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced921,840,143870921,502,64337,282,2396750
MoleculeTotal
Length
Mitochondrion MT15,650