Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
Download
IDs: 64501 [UID] 784738 [GenBank] 1069398 [RefSeq]
Tarsier (Tarsius syrichta) Sequence assembly release notes: A female tarsier (Tarsius syrichta) genome was sequenced to 48X coverage using ABI3730, 454 and Illumina sequencing technology. The DNA source (animal id# Samal-C Ts95f) was kindly provided by the Duke University Lemur ... Center. The combined sequence reads were assembled using modified Celera assembler software (courtesy of Dr. Aleksey Zimin) and filtered for all known non-tarsier sequence contaminants. This second draft assembly is referred to as Tarsius_syrichta_2.0.1. In the final assembly, referred to as Tarsius_syrichta_2.0.1, there were 492,903 contigs with an N50 contig length of 38 Kb. There were 337,189 scaffolds with the N50 scaffold length of 401 Kb. A total of 3.4 Gb was assembled in contigs. Tarsier sequencing and assembly credits: DNA source (contact) - Duke University Lemur Center, 3705 Erwin Road, Durham, NC 27705-5000 Production sequencing - The Genome Institute, Washington University School of Medicine, St Louis, MO Sequence assembly - Dr. Aleksey Zimin, Institute for Physical Science and Technology, University of Maryland, College Park, MD Sequence assembly curation - Patrick Minx, The Genome Institute, Washington University School of Medicine, St Louis, MO Funding for the sequence characterization of the tarsier genome was provided by the National Human Genome Research Institute (NHGRI), National Institutes of Health (NIH). Author list: Wesley Warren, Richard K. Wilson Assembly statistics: Tarsius syrichta 2.0.1 *** Contiguity: Contig *** Total contig number: 492903 Total contig bases: 3405738683 bp Average contig length: 6910 bp Maximum contig length: 450504 bp N50 contig length: 38165 bp N50 contig number: 23500 *** Contiguity: Supercontig *** Total supercontig number: 337189 Average supercontig length: 10100 bp Maximum supercontig length: 4016116 bp N50 supercontig length: 400604 bp N50 supercontig number: 2357 Scaffolds > 1M: 368 Scaffold 250K--1M: 3538 Scaffold 100K--250K: 2845 Scaffold 10--100K: 11962 Scaffold 5--10K: 15770 Scaffold 2--5K: 24342 Scaffold 0--2K: 278364 more
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on