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GeoFor_1.0

Organism name:
Geospiza fortis (medium ground-finch)
Sex:
female
BioSample:
SAMN00839579
BioProject:
PRJNA156703
Submitter:
Beijing Genomics Institute
Date:
2012/07/25
Synonyms:
geoFor1
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000277835.1 (latest)
RefSeq assembly accession:
GCF_000277835.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AKZB01
Assembly method:
SOAPdenovo v. 2.01
Genome coverage:
115x
Sequencing technology:
Illumina HiSeq 2000

IDs: 402638 [UID] 402638 [GenBank] 773638 [RefSeq]

See Genome Information for Geospiza fortis

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length1,065,292,181
Total ungapped length1,041,286,029
Gaps between scaffolds0
Number of scaffolds27,239
Scaffold N505,255,844
Scaffold L5054
Number of contigs95,828
Contig N5030,521
Contig L509,807
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)95,828

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,065,292,18127,2391,041,286,0295,255,84468,5890