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Comment

Background:
 The Zonotrichia albicollis DNA sample was obtained from Dr. Elaina M. Tuttle, Indiana State University. This monoisolate was obtained from an adult Tan morph male. Genomic DNA was prepared by Dr. Elaina M. Tuttle lab, Indiana State University ... from red blood cells (hematocrit) from one individual (Banded as MXXF; karyotyped as ZAL 2/2, ZAL 3a/3a, ZAL Z/Z).
 Total sequence input coverage of Illumina instrument reads was 
95X (fragments, 3, and 8kbs) using a genome size estimate of 1.2Gb. The combined sequence reads were assembled using the ALLPATHS software (Broad Institute). This draft assembly was referred to as Zonotrichia albicollis 1.0.1. This version has been gap filled and cleaned of contaminating contigs. The assembly is made up of a total of 6018 scaffolds with an N50 scaffold length of over 4.9Mb (N50 contig length was 113kb). The assembly spans 1.03Gb, and has an assembled coverage of 63.3X.
 This work was supported by NIH grant R01 1R01GM084229 to EMT, Indiana State University
 For questions regarding this Zonotrichia albicollis 1.0.1 assembly please contact Dr. Wesley Warren, Washington University School of Medicine (wwarren@genome.wustl.edu). Funding for the sequence characterization of the Zonotrichia albicollis genome was provided by Dr. Elaina Tuttle. 
 Source DNA samples can be obtained from Elaine M. Tuttle, Dept. of Life Sciences, Science 209, Indiana State University, Terra Haute, IN 47809.

 Credits:
 DNA source - Dr. Elaina M. Tuttle, Indiana State University 
 Sequencing - The Genome Institute, Washington University School of Medicine, St Louis, MO.
 Sequence assembly - The Genome Institute, Washington University School of Medicine, St Louis, MO.

 Citation upon use of this assembly in a manuscript:
 Please refer to the Genome Institute Data Use Policy (http://genome.wustl.edu/data/data_use_policy) for further information.
 Basic Stats
 *** Contiguity: Contig *** Total contig number: 37686 Total contig bases: 1006306597 bp Average contig length: 26702 bp Maximum contig length: 1084881 bp N50 contig length: 112748 bp N50 contig number: 2385
 *** Contiguity: Supercontig *** Total supercontig number: 6018 Average supercontig length: 167216 bp Maximum supercontig length: 44845482 bp N50 supercontig length: 4924764 bp N50 supercontig number: 48
 *** Scaffold Distribution*** Scaffolds > 1M: 200 Scaffold 250K--1M: 168 Scaffold 100K--250K: 126 Scaffold 10--100K: 767 Scaffold 5--10K: 673 Scaffold 2--5K: 1431 Scaffold 0--2K: 2653  more

Global statistics