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Eutsalg1_0

Organism name:
Eutrema salsugineum (saltwater cress)
BioSample:
SAMN02981485
BioProject:
PRJNA73205
Submitter:
Joint Genome Institute
Date:
2013/11/05
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000478725.1 (latest)
RefSeq assembly accession:
GCF_000478725.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ANOA01
Assembly method:
ARACHNE v. 20071016_modfied
Expected final version:
no
Genome coverage:
7.78X
Sequencing technology:
ABI 3730

IDs: 79771 [UID] 854938 [GenBank] 1007988 [RefSeq]

See Genome Information for Eutrema salsugineum

There are 3 assemblies for this organism

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History (Show revision history)

Comment

DNA is from plants that had been inbred for multiple generations, from seeds that had originally been collected by Ziyi Cao in the Yellow River Delta area near Dongying City, Shandong province, China, at approximately 37.32N, 118.47E

Global statistics

Total sequence length243,110,105
Total ungapped length238,444,523
Gaps between scaffolds0
Number of scaffolds638
Scaffold N5013,441,892
Scaffold L508
Number of contigs3,658
Contig N50222,588
Contig L50311
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3,658

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced243,110,105638238,444,52313,441,8923,0200