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PopEup_1.0

Organism name:
Populus euphratica (Euphrates poplar)
BioSample:
SAMN02981499
BioProject:
PRJNA178692
Submitter:
Lanzhou University
Date:
2014/08/12
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000495115.1 (latest)
RefSeq assembly accession:
GCF_000495115.1 (replaced)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome Pltd
  • Data displayed for RefSeq version
WGS Project:
AOFL01
Assembly method:
BAC by BAC v. Oct-2011
Genome coverage:
115x (4.4x fosmid+111x WGS)
Sequencing technology:
Illumina Hiseq2000

IDs: 81971 [UID] 862478 [GenBank] 1463318 [RefSeq]

See Genome Information for Populus euphratica

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length496,032,534
Total ungapped length472,687,807
Gaps between scaffolds0
Number of scaffolds9,615
Scaffold N50482,055
Scaffold L50204
Number of contigs32,789
Contig N5040,490
Contig L503,071
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)32,789

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced495,875,7689,614472,531,041482,84623,1740
MoleculeTotal
Length
Chloroplast Pltd156,766