U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM58171v1

Organism name:
Acinetobacter sp. 479375 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 479375
BioSample:
SAMN02371044
BioProject:
PRJNA194677
Submitter:
Institute for Genome Sciences
Date:
2014/02/25
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000581715.1 (latest)
RefSeq assembly accession:
GCF_000581715.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JEZN01
Assembly method:
MaSuRCA v. 2.0.3.1
Genome coverage:
86.15027815x
Sequencing technology:
Illumina

IDs: 123631 [UID] 955828 [GenBank] 1432178 [RefSeq]

See Genome Information for Acinetobacter sp. 479375

History (Show revision history)

Comment

Bacteria and source DNA available from BEI

Global statistics

Total sequence length3,456,217
Total ungapped length3,456,217
Number of contigs81
Contig N50171,112
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)81

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,456,217813,456,217171,11200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter sp. 479375Acinetobacter sp. 479375

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_016726205.1Acinetobacter ursingiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type97.6387.1483.37

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna