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ASM58207v1

Organism name:
Acinetobacter sp. 1578804 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 1578804
BioSample:
SAMN02385038
BioProject:
PRJNA194765
Submitter:
Institute for Genome Sciences
Date:
2014/02/25
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000582075.1 (latest)
RefSeq assembly accession:
GCF_000582075.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JEYF01
Assembly method:
MaSuRCA v. 2.0.3.1
Genome coverage:
114.3525613x
Sequencing technology:
Illumina

IDs: 123811 [UID] 956188 [GenBank] 1313898 [RefSeq]

See Genome Information for Acinetobacter sp. 1578804

History (Show revision history)

Comment

Bacteria and source DNA available from BEI

Global statistics

Total sequence length4,096,101
Total ungapped length4,096,101
Number of contigs168
Contig N5090,298
Contig L5016
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)168

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,096,1011684,096,10190,29800

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter sp. 1578804Acinetobacter sp. 1578804

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_024390955.1Acinetobacter pittiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.9692.2893.93

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna