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ASM58799v1

Organism name:
Acinetobacter sp. 1179249 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 1179249
BioSample:
SAMN02415043
BioProject:
PRJNA194866
Submitter:
Institute for Genome Sciences
Date:
2014/03/11
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000587995.1 (latest)
RefSeq assembly accession:
GCF_000587995.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JFXC01
Assembly method:
MaSuRCA v. 2.0.3.32
Genome coverage:
72.03589585x
Sequencing technology:
Illumina

IDs: 126841 [UID] 962538 [GenBank] 1310618 [RefSeq]

See Genome Information for Acinetobacter sp. 1179249

History (Show revision history)

Comment

Bacteria and source DNA available from BEI

Global statistics

Total sequence length3,938,493
Total ungapped length3,938,493
Number of contigs77
Contig N50155,959
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)77

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,938,493773,938,493155,95900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter sp. 1179249Acinetobacter sp. 1179249

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000368085.1Acinetobacter nosocomialistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type97.9686.9288.20

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna