U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



S.galili_v1.0

Organism name:
Nannospalax galili (Upper Galilee mountains blind mole rat)
Isolate:
Female #2095
Sex:
female
BioSample:
SAMN02299330
BioProject:
PRJNA213569
Submitter:
BGI
Date:
2014/06/05
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000622305.1 (latest)
RefSeq assembly accession:
GCF_000622305.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
AXCS01
Assembly method:
SOAPdenovo v. 2.04.4
Genome coverage:
86x
Sequencing technology:
Illumina HiSeq 2000

IDs: 182301 [UID] 1095108 [GenBank] 1186268 [RefSeq]

See Genome Information for Nannospalax galili

History (Show revision history)

Comment

Global statistics

Total sequence length3,061,424,619
Total ungapped length2,913,448,405
Gaps between scaffolds0
Number of scaffolds154,976
Scaffold N503,618,479
Scaffold L50238
Number of contigs356,097
Contig N5030,353
Contig L5028,338
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)356,097

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,061,408,210154,9752,913,431,9963,618,479201,1210
MoleculeTotal
Length
Mitochondrion MT16,409