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ASM69087v1

Organism name:
Gavia stellata (red-throated loon)
Isolate:
BGI_N328
Sex:
male
BioSample:
SAMN02324832
BioProject:
PRJNA212895
Submitter:
BGI
Date:
2014/05/13
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_000690875.1 (latest)
RefSeq assembly accession:
GCF_000690875.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for GenBank version
WGS Project:
JJRM01
Assembly method:
SOAPdenovo v. 1.6
Genome coverage:
33x
Sequencing technology:
Illumina HiSeq

IDs: 178481 [UID] 1069388 [GenBank] 1362208 [RefSeq]

See Genome Information for Gavia stellata

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Annotation was added to this genome in September 2014

Global statistics

Total sequence length1,129,677,294
Total ungapped length1,122,809,873
Gaps between scaffolds0
Number of scaffolds61,830
Scaffold N5045,532
Scaffold L507,094
Number of contigs126,712
Contig N5024,321
Contig L5013,686
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)126,712

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,129,677,29461,8301,122,809,87345,53264,8820