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ASM70892v1

Organism name:
Phalacrocorax carbo (great cormorant)
Isolate:
BGI_N336
Sex:
male
BioSample:
SAMN02339889
BioProject:
PRJNA212903
Submitter:
BGI
Date:
2014/06/17
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_000708925.1 (latest)
RefSeq assembly accession:
GCF_000708925.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JMFI01
Assembly method:
SOAPdenovo v. 1.6
Genome coverage:
24x
Sequencing technology:
Illumina HiSeq

IDs: 187851 [UID] 1137988 [GenBank] 1341788 [RefSeq]

See Genome Information for Phalacrocorax carbo

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Annotation was added to this genome in September 2014

Global statistics

Total sequence length1,138,967,842
Total ungapped length1,130,205,178
Gaps between scaffolds0
Number of scaffolds64,312
Scaffold N5048,427
Scaffold L506,715
Number of contigs162,787
Contig N5017,343
Contig L5019,360
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)162,787

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,138,967,84264,3121,130,205,17848,42798,4750