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ASM77090v1

Organism name:
Acinetobacter baumannii TYTH-6 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: TYTH-6
BioSample:
SAMN03160859
BioProject:
PRJNA74563
Submitter:
National Tsing Hua University
Date:
2014/11/04
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000770905.1 (latest)
RefSeq assembly accession:
GCF_000770905.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AGSU01
Assembly method:
Clover v. 0.300
Genome coverage:
706x
Sequencing technology:
Illumina GA IIx

IDs: 219191 [UID] 1367638 [GenBank] 1371688 [RefSeq]

See Genome Information for Acinetobacter baumannii

There are 26545 assemblies for this organism

See more

History (Show revision history)

Comment

Source DNA and bacteria are available from Ming-Li Liou, No. 306, Yuanpei Street, Hsin-Chu, 30015, Taiwan (R.O.C)

Global statistics

Total sequence length3,944,163
Total ungapped length3,944,163
Number of contigs137
Contig N5052,270
Contig L5019
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)137

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,944,1631373,944,16352,27000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter baumannii TYTH-6Acinetobacter baumannii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_018123985.1Acinetobacter baumanniitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_018123985.1Acinetobacter baumanniitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.7789.9789.15
Best-match type99.7789.9789.15

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna