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Source database (GenBank or RefSeq) File type

aradu.V14167.gnm2.J7QH

Organism name:

Arachis duranensis (eudicots)

Infraspecific name:

Cultivar: V14167

BioSample:

SAMN02982871

BioProject:

PRJNA258023

Submitter:

The International Peanut Genome Initiative

Date:

2020/09/21

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_000817695.3 (latest)

RefSeq assembly accession:

GCF_000817695.3 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome Pltd

Data displayed for RefSeq version

WGS Project:

JQIN02

Assembly method:

SOAPdenovo v. 2.05

Expected final version:

yes

Genome coverage:

260.0x

Sequencing technology:

Illumina HiSeq; Moleculo long reads

IDs: 8130851 [UID] 22230888 [GenBank] 37318588 [RefSeq]

See Genome Information for Arachis duranensis

Pathogen Detection Resources

There are 5 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000817695.3	≠	GCF_000817695.3	aradu.V14167.gnm2.J7QH	Chromosome	Latest GenBank, Latest RefSeq
GCA_000817695.2	=	GCF_000817695.2	Aradu1.1	Chromosome	Replaced GenBank, Replaced RefSeq
GCA_000817695.1	=	GCF_000817695.1	Aradu1.0	Chromosome	GenBank suppressed, RefSeq suppressed

Comment

Global statistics

Total sequence length	1,081,891,522
Total ungapped length	951,876,209
Gaps between scaffolds	8
Number of scaffolds	1,589
Scaffold N50	108,052,799
Scaffold L50	5
Number of contigs	132,280
Contig N50	24,729
Contig L50	11,083
Total number of chromosomes and plasmids	11
Number of component sequences (WGS or clone)	1,589

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM025807.1	=	NC_029772.3	0
Chromosome 2	CM025808.1	=	NC_029773.3	0
Chromosome 3	CM025809.1	=	NC_029774.3	0
Chromosome 4	CM025810.1	=	NC_029775.3	0
Chromosome 5	CM025811.1	=	NC_029776.3	0
Chromosome 6	CM025812.1	=	NC_029777.3	0
Chromosome 7	CM025813.1	=	NC_029778.3	0
Chromosome 8	CM025814.1	=	NC_029779.3	0
Chromosome 9	CM025815.1	=	NC_029780.3	0
Chromosome 10	CM025816.1	=	NC_029781.3	0
unplaced	n/a	n/a	n/a	1,570

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	1,081,735,204	1,588	951,719,891	108,052,799	130,691	8
Chromosome 1	106,063,421	5	97,395,328	72,130,412	11,126	4
Chromosome 2	93,849,414	1	81,353,171	93,849,414	12,240	0
Chromosome 3	135,323,197	1	120,562,146	135,323,197	15,836	0
Chromosome 4	121,991,358	1	106,641,217	121,991,358	15,689	0
Chromosome 5	108,052,799	1	95,762,623	108,052,799	12,860	0
Chromosome 6	111,137,723	1	97,661,248	111,137,723	13,777	0
Chromosome 7	78,749,368	1	69,828,897	78,749,368	9,480	0
Chromosome 8	49,941,543	5	46,578,732	18,476,140	4,358	4
Chromosome 9	119,530,416	1	107,475,405	119,530,416	13,843	0
Chromosome 10	106,229,690	1	92,464,004	106,229,690	14,133	0
unplaced	50,866,275	1,570	35,997,120	51,926	7,349	0

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aradu.V14167.gnm2.J7QH

See Genome Information for Arachis duranensis

Pathogen Detection Resources

There are 5 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Assembly Unit Name
Primary Assembly
non-nuclear