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Pxut_1.0

  • Anomalous assembly.
Organism name:
Papilio xuthus (Asian swallowtail)
BioSample:
SAMD00018698
BioProject:
PRJDB2956
Submitter:
Tokyo Institute of Technology
Date:
2015/02/02
Assembly level:
Scaffold
Genome representation:
full
Assembly anomaly:
contaminated
Excluded from RefSeq:
  • contaminated
GenBank assembly accession:
GCA_000836235.1 (replaced)
RefSeq assembly accession:
GCF_000836235.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BBJE01
Assembly method:
Platanus v. 1.2.1
Genome coverage:
300x
Sequencing technology:
Illumina HiSeq2500

IDs: 252161 [UID] 1530348 [GenBank] 2033688 [RefSeq]

See Genome Information for Papilio xuthus

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length243,890,167
Total ungapped length237,937,214
Gaps between scaffolds0
Number of scaffolds5,572
Scaffold N506,198,915
Scaffold L5016
Number of contigs10,777
Contig N50128,246
Contig L50528
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)10,777

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced243,890,1675,572237,937,2146,198,9155,2050