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Source database (GenBank or RefSeq) File type

AptMant0

This assembly has been replaced. See current version

Organism name:

Apteryx mantelli mantelli (North Island brown kiwi)

BioSample:

SAMEA2560515

BioProject:

PRJEB6383

Submitter:

MPI-EVA

Date:

2015/06/21

Assembly level:

Contig

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_001039765.1 (replaced)

RefSeq assembly accession:

GCF_001039765.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in GenBank: 302107 unplaced scaffolds
Unplaced scaffolds shorter than 1,000 bases were omitted from the RefSeq assembly. 23 unplaced scaffolds matching foreign sequences were also omitted from the RefSeq assembly.

Data displayed for RefSeq version

Genome coverage:

37x

IDs: 479431 [UID] 1836118 [GenBank] 2307598 [RefSeq]

See Genome Information for Apteryx mantelli

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001039765.2	n/a	n/a	AptMant0	Contig	Latest GenBank
GCA_001039765.1	≠	GCF_001039765.1	AptMant0	Contig	Latest RefSeq, Replaced GenBank

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI
Annotation Status::Full annotation
Annotation Version::Apteryx australis mantelli Annotation Release 100
Annotation Pipeline::NCBI eukaryotic genome annotation pipeline
Annotation Software Version::6.4
Annotation Method::Best-placed RefSeq; Gnomon
Features Annotated::Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	1,523,972,539
Total ungapped length	1,311,194,650
Number of contigs	209,195
Contig N50	17,252
Contig L50	21,821
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	24,720

Assembly

Genome Assembly

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AptMant0

See Genome Information for Apteryx mantelli

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

Global statistics

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