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Dnoxia_1.0

Organism name:
Diuraphis noxia (Russian wheat aphid)
Infraspecific name:
Strain: RWA2
Sex:
female
BioSample:
SAMN02693874
BioProject:
PRJNA233413
Submitter:
USDA-ARS, Stillwater, Oklahoma
Date:
2015/07/23
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001186385.1 (latest)
RefSeq assembly accession:
GCF_001186385.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JOTR01
Assembly method:
AllPathsLG v. FEB-2013
Expected final version:
yes
Genome coverage:
104.0x
Sequencing technology:
Illumina HiSeq

IDs: 430511 [UID] 2027988 [GenBank] 2853938 [RefSeq]

See Genome Information for Diuraphis noxia

There are 7 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length395,073,589
Total ungapped length296,540,817
Gaps between scaffolds0
Number of scaffolds5,637
Scaffold N50397,774
Scaffold L50281
Number of contigs50,913
Contig N5013,141
Contig L505,852
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)5,637

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced395,057,8055,636296,525,033397,77445,2760
MoleculeTotal
Length
Mitochondrion MT15,784