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SAMN03320098_v1.1

Organism name:
Sinocyclocheilus rhinocerous (bony fishes)
Isolate:
Xijiao
Sex:
female
BioSample:
SAMN03320098
BioProject:
PRJNA274017
Submitter:
BGI, Shenzhen
Date:
2015/12/14
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001515625.1 (latest)
RefSeq assembly accession:
GCF_001515625.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
LAVF01
Assembly method:
SOAPdenovo v. 2.04
Genome coverage:
48x
Sequencing technology:
Illumina Hiseq2000

IDs: 619441 [UID] 2790168 [GenBank] 3208998 [RefSeq]

See Genome Information for Sinocyclocheilus rhinocerous

History (Show revision history)

Comment

Global statistics

Total sequence length1,655,786,410
Total ungapped length1,521,478,558
Gaps between scaffolds0
Number of scaffolds164,173
Scaffold N50945,738
Scaffold L50486
Number of contigs314,963
Contig N5018,758
Contig L5023,365
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)314,963

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,655,769,822164,1721,521,461,970945,738150,7900
MoleculeTotal
Length
Mitochondrion MT16,588