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Source database (GenBank or RefSeq) File type

ASM223713v2

This assembly has been replaced. See current version

Organism name:

Teleopsis dalmanni (flies)

Isolate:

Sex:

female

BioSample:

SAMN07271145

BioProject:

PRJNA391339

Submitter:

University of Maryland

Date:

2020/11/06

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_002237135.2 (replaced)

RefSeq assembly accession:

GCF_002237135.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in GenBank: chromosome MT

Data displayed for RefSeq version

WGS Project:

NLCU02

Assembly method:

Proximo v. January-2019; MaSuRCA v. April-2015

Expected final version:

yes

Genome coverage:

106.73x

Sequencing technology:

PacBio; Illumina HiSeq; Illumina MiSeq; Illumina GAIIx; 454

IDs: 8426361 [UID] 22938928 [GenBank] 23586268 [RefSeq]

See Genome Information for Teleopsis dalmanni

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_002237135.5	n/a	n/a	Teleopsis dalmanni v 3.1	Chromosome	Latest GenBank
GCA_002237135.4	n/a	n/a	Teleopsis dalmanni v 3.0	Chromosome	Replaced GenBank
GCA_002237135.2	≠	GCF_002237135.1	ASM223713v2	Chromosome	Latest RefSeq, Replaced GenBank
GCA_002237135.1	n/a	n/a	Tel_dalmanni_2A_v1.0	Scaffold	Replaced GenBank

Comment

Global statistics

Total sequence length	623,660,103
Total ungapped length	621,290,083
Gaps between scaffolds	14,315
Number of scaffolds	19,962
Scaffold N50	117,344
Scaffold L50	1,086
Number of contigs	25,839
Contig N50	62,489
Contig L50	2,039
Total number of chromosomes and plasmids	3
Number of component sequences (WGS or clone)	25,367

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM026970.1	=	NC_051846.1	0
Chromosome 2	CM026971.1	=	NC_051847.1	0
Chromosome X	CM026972.1	=	NC_051848.1	0
unplaced	n/a	n/a	n/a	5,644

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	623,660,103	19,962	621,290,083	117,344	5,877	14,315
Chromosome 1	235,434,165	6,883	234,299,770	103,332	2,476	6,882
Chromosome 2	246,003,176	6,461	244,976,523	105,636	2,759	6,460
Chromosome X	102,199,558	974	102,016,239	1,007,588	617	973
unplaced	40,023,204	5,644	39,997,551	9,049	25	0

Assembly

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ASM223713v2

See Genome Information for Teleopsis dalmanni

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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