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ASM248314v1

Organism name:
Cellvibrio sp. UBA7671 (g-proteobacteria)
Taxonomy check:
OK
Isolate:
UBA7671
BioSample:
SAMN06456976
BioProject:
PRJNA348753
Submitter:
University of Queensland
Date:
2017/10/06
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
GenBank assembly accession:
GCA_002483145.1 (latest)
RefSeq assembly accession:
GCF_002483145.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
DLHJ01
Assembly method:
CLC de novo assembler v. 4.4.1
Expected final version:
yes
Genome coverage:
64.24x
Sequencing technology:
Illumina

IDs: 1292781 [UID] 5230928 [GenBank] 53652428 [RefSeq]

See Genome Information for Cellvibrio sp. UBA7671

History (Show revision history)

Comment

Global statistics

Total sequence length5,043,891
Total ungapped length5,043,075
Gaps between scaffolds0
Number of scaffolds19
Scaffold N50544,490
Scaffold L504
Number of contigs33
Contig N50453,553
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)19

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,043,891195,043,075544,490140

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Cellvibrio sp. UBA7671Cellvibrio sp. UBA7671

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_035317345.1Cellvibrio fontiphilustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type81.9610.6613.16

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna