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Csec_1.0

Organism name:
Cryptotermes secundus (termites)
BioSample:
SAMN06690155
BioProject:
PRJNA381866
Submitter:
Westfaelische Wilhelms-University
Date:
2018/01/17
Release type:
minor
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_002891405.2 (latest)
RefSeq assembly accession:
GCF_002891405.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
NEVH01
Assembly method:
SOAPdenovo v. 2.04; gapcloser v. 1.10; kgf v. 1.18
Expected final version:
yes
Genome coverage:
45.0x
Sequencing technology:
Illumina HiSeq

IDs: 1677991 [UID] 6374058 [GenBank] 6374078 [RefSeq]

See Genome Information for Cryptotermes secundus

History (Show revision history)

Comment

Global statistics

Total sequence length1,018,932,804
Total ungapped length998,064,252
Gaps between scaffolds0
Number of scaffolds55,483
Scaffold N501,184,893
Scaffold L50245
Number of contigs89,199
Contig N5063,940
Contig L504,518
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)55,483

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,018,932,80455,483998,064,2521,184,89333,7160