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Soryzae_2.0

Organism name:
Sitophilus oryzae (rice weevil)
Infraspecific name:
Breed: Bouriz
BioSample:
SAMN08382431
BioProject:
PRJNA431034
Submitter:
BF2I
Date:
2019/09/09
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_002938485.2 (latest)
RefSeq assembly accession:
GCF_002938485.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
PPTJ02
Assembly method:
Minia v. JUNE-2019; WENGAN v. JUNE-2019
Expected final version:
yes
Genome coverage:
101.0x
Sequencing technology:
Illumina HiSeq; Oxford Nanopore MinION; PacBio RS

IDs: 4555801 [UID] 13696868 [GenBank] 13876818 [RefSeq]

See Genome Information for Sitophilus oryzae

History (Show revision history)

Comment

Global statistics

Total sequence length770,567,808
Total ungapped length757,926,874
Gaps between scaffolds0
Number of scaffolds2,025
Scaffold N502,860,826
Scaffold L5073
Number of contigs4,474
Contig N501,039,787
Contig L50189
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)2,025

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced770,550,2062,024757,909,2722,860,8262,4490
MoleculeTotal
Length
Mitochondrion MT17,602