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notPer1

Organism name:
Nothoprocta perdicaria (birds)
Isolate:
Ctin4
Sex:
male
BioSample:
SAMN08476459
BioProject:
PRJNA433110
Submitter:
Harvard University
Date:
2018/07/26
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_003342845.1 (latest)
RefSeq assembly accession:
GCF_003342845.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
PTEW01
Assembly method:
AllPaths v. 50191
Expected final version:
yes
Genome coverage:
76.2x
Sequencing technology:
Illumina HiSeq

IDs: 1834721 [UID] 6954358 [GenBank] 7011328 [RefSeq]

See Genome Information for Nothoprocta perdicaria

History (Show revision history)

Comment

Global statistics

Total sequence length965,904,370
Total ungapped length953,686,474
Gaps between scaffolds0
Number of scaffolds2,217
Scaffold N503,369,196
Scaffold L5080
Number of contigs23,009
Contig N5095,599
Contig L502,873
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,217

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced965,904,3702,217953,686,4743,369,19620,7920