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ASM479886v1

Organism name:
Varanus komodoensis (Komodo dragon)
Infraspecific name:
Strain: SLA01
Sex:
male
BioSample:
SAMN10967258
BioProject:
PRJNA523222
Submitter:
Gladstone Institutes
Date:
2019/04/17
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004798865.1 (latest)
RefSeq assembly accession:
GCF_004798865.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
SJPD01
Assembly method:
Bionano IrysSolve v. 5134; 10x Genomics Supernova v.1.0; SSPACE-LongRead v. 1-1
Expected final version:
yes
Genome coverage:
144.0x
Sequencing technology:
PacBio; Oxford Nanopore MinION; BioNano physical mapping; 10X Genomics

IDs: 2580521 [UID] 9338508 [GenBank] 29500418 [RefSeq]

See Genome Information for Varanus komodoensis

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Annotation was added to the contigs on August 2020

Global statistics

Total sequence length1,507,945,839
Total ungapped length1,493,307,389
Gaps between scaffolds0
Number of scaffolds1,411
Scaffold N5023,831,982
Scaffold L5017
Number of contigs20,696
Contig N50189,463
Contig L502,367
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,411

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,507,945,8391,4111,493,307,38923,831,98219,2850