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ASM782708v3

Organism name:
Peromyscus californicus insignis (California mouse)
Infraspecific name:
Strain: IS
Sex:
female
BioSample:
SAMN10698868
BioProject:
PRJNA513219
Submitter:
University of Maryland
Date:
2022/04/27
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_007827085.3 (latest)
RefSeq assembly accession:
GCF_007827085.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
VALE03
Assembly method:
PBIPA v. 1.3.1
Expected final version:
yes
Genome coverage:
18.0x
Sequencing technology:
PacBio Sequel

IDs: 12613101 [UID] 33008648 [GenBank] 38235478 [RefSeq]

See Genome Information for Peromyscus californicus

History (Show revision history)

Comment

Global statistics

Total sequence length2,467,923,528
Total ungapped length2,467,800,810
Gaps between scaffolds0
Number of scaffolds237
Scaffold N50115,047,232
Scaffold L509
Number of contigs784
Contig N508,224,858
Contig L5087
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)237

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,467,923,5282372,467,800,810115,047,2325470