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ASM1131977v1

Organism name:
Oceanimonas sp. MB9 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: MB9
BioSample:
SAMN11998046
BioProject:
PRJNA548031
Submitter:
Technical University of Denmark
Date:
2020/03/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_011319775.1 (latest)
RefSeq assembly accession:
GCF_011319775.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
VFBE01
Assembly method:
Ray v. 2.3.1
Expected final version:
yes
Genome coverage:
100x
Sequencing technology:
Illumina MiSeq

IDs: 6233471 [UID] 17651608 [GenBank] 17725438 [RefSeq]

See Genome Information for Oceanimonas sp. MB9

History (Show revision history)

Comment

Annotated using prokka 1.12 from https://github.com/tseemann/prokka

Global statistics

Total sequence length3,536,925
Total ungapped length3,536,925
Number of contigs11
Contig N50912,941
Contig L502
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)11

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,536,925113,536,925912,94100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Oceanimonas sp. MB9Oceanimonas sp. MB9

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_002242685.1Oceanimonas doudoroffiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.9193.8886.63

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna