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TpBJ-2018v1

Organism name:
Thrips palmi (thrips)
Isolate:
BJ-2018
BioSample:
SAMN14133010
BioProject:
PRJNA607431
Submitter:
Beijing Academy of Agriculture and Forestry Sciences
Date:
2020/04/29
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_012932325.1 (latest)
RefSeq assembly accession:
GCF_012932325.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JABBCG01
Assembly method:
wtdbg v. 2.5
Expected final version:
yes
Genome coverage:
123.8x
Sequencing technology:
PacBio Sequel

IDs: 7049731 [UID] 19354988 [GenBank] 19563448 [RefSeq]

See Genome Information for Thrips palmi

History (Show revision history)

Comment

Global statistics

Total sequence length237,845,416
Total ungapped length237,152,416
Gaps between scaffolds0
Number of scaffolds17
Scaffold N5014,670,875
Scaffold L507
Number of contigs1,324
Contig N50567,478
Contig L50109
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)17

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced237,830,08316237,137,08314,670,8751,3070
MoleculeTotal
Length
Mitochondrion MT15,333